PrimerName Direction Genome Marker name Owner Sequence Specificity project name Reference Pos_on_seq_or_amplic_size Comment 1472 Reverse Mitochondrion 16S JEMU_RBINS AGATAGAAACCAACCTGG Decapoda GTIGoussanou Crandall and Fitzpatrick (1996) 570 45°C Ele-ND5-F3 Forward Mitochondrion ND5 JEMU_RBINS TCCTCACGTACATACTCAAAACC Loxodonta & Elephas DNADD Cappellini et al. 2013 70-95 bp Annealing at 50 °C 1082R Reverse Nucleus ITS JEMU_RBINS TTAGTTTCTTTTCCTCCGCTT Clitellata (annelids) SideHaplotaxis Liu & Erseu 2017 1084R Reverse Nucleus ITS JEMU_RBINS YGTTAGTTTCTTTTCCTCCGCTT Clitellata (annelids) SideHaplotaxis Liu & Erseu 2017 1100R Reverse Nucleus 18S JEMU_RBINS (aliquot) GATCGTCTTCGAACCTCTG Annelida Cryoli "Norén, M. & Jondelius, U. (1999) Phylogeny of the Prolicithophora (Platyhelminthes) inferred from 18S rDNA sequences. Cladistics, 15, pp. 103–112" 1750bp 1100R Reverse Nucleus 18S JEMU_RBINS GATCGTCTTCGAACCTCTG Annelida Cryoli "Norén, M. & Jondelius, U. (1999) Phylogeny of the Prolicithophora (Platyhelminthes) inferred from 18S rDNA sequences. Cladistics, 15, pp. 103–112" 1750bp 12Sa Forward Mitochondrion 12S rRNA JEMU_RBINS AAACTGGGATTAGATACCCCACTAT Reptiles SideReptiles Kocher et al. 1989 307 48º 12SAI NA Mitochondrion 12S EVA AAACTAGGATTAGATACCCTATTAT NA Oonopidae NA NA NA 12Sb Reverse Mitochondrion 12S rRNA JEMU_RBINS TGAGGAGGGTGACGGGCGGT Reptiles SideReptiles Kocher et al. 1989 307 48º 12SBI NA Mitochondrion 12S EVA AAGAGCGACGGGCGATGTGT NA Oonopidae NA NA NA 12SCC-FW Forward Mitochondrion 12S JEMU_RBINS TGAAAATAGATAACGAAAGTAGCTTTGAACTA Capreolus capreolus DNADD Fajardo 2007 <200bp 12SCE-FW Forward Mitochondrion 12S JEMU_RBINS CAAAAACATATAACGAAAGTAACTTTCCGACC Cervus Elaphus DNADD Fajardo 2007 <200bp 12SCERV-REV Reverse Mitochondrion 12S JEMU_RBINS AAAGCACCGCCAAGTCCTT Cervidae DNADD Fajardo 2007 <200bp 12SDD-FW Forward Mitochondrion 12S JEMU_RBINS TAAACAACGAAGGTAACCTTATCG Dama dama DNADD Fajardo 2007 <200bp 12SE1 Forward Mitochondrion 12S Patrick Martin AAAACATGGATTAGATACCCRYCTAT Jamieson et al. 2002 12Sf Forward Mitochondrion 12S Jemu TACTATGTTACGACTTAT Termites DAG 3Han_Khambhampati_and_Eggleton_(unpublished) NA NA 12SF Forward Mitochondrion 12S EVA AAGAGCGACGGGCGATGTGT NA NA SRJ14233 NA NA 12S-FW Forward Mitochondrion 12S JEMU_RBINS GGTAAATCTCGTGCCAGCCA Cervidae DNADD Fajardo 2007 <200bp 12SfwHym Forward Mitochondrion 12S JEMU_RBINS gatagtgacgggcaatttgtac Bees HeteroplasHym adapted by Sonet unpublished 12SH Reverse Mitochondrion 12S Patrick Martin ACCTACTTTGTTACGACTTATCT Jamieson et al. 2002 12SH2 Forward Mitochondrion 12S JEMU_RBINS ATGCACTTTCCAGTACATCTAC Decapoda GTIGoussanou2 Fratini 2005 630bp with 12SL4 12SL4 Reverse Mitochondrion 12S JEMU_RBINS GTGCCAGCMGCCGCGGTTA Decapoda GTIGoussanou2 Schubart 2006 630bp with 12SH2 12Sr Reverse Mitochondrion 12S Jemu AAACTAGGATTAGATACCC Termites DAG 3Han_Khambhampati_and_Eggleton_(unpublished) NA NA 12SR Reverse Mitochondrion 12S EVA CTAGGATTAGATACCCTATTAT NA NA NA NA NA 12S-REV Reverse Mitochondrion 12S JEMU_RBINS TCCAGTATGCTTACCTTGTTACGAC Cervidae DNADD Fajardo 2007 <200bp 1482-R Reverse Nucleus 18S JEMU_RBINS AGGGCATCACAGACCTGTTA Holothuroidea SideEchino Lacey et al. 2005 381 - 396 15424F Forward Mitochondrion CR JEMU_RBINS GCACCCAAAGCTGAAATTC Canidae DNADD Lee et al 2015 PONE 10.1371/journal.pone.0125759 ca 150 bp 15441F Forward Mitochondrion CR JEMU_RBINS TCTTCTTAAACTATTCCCTG Canidae DNADD Lee et al 2015 PONE 10.1371/journal.pone.0125759 ca 150 bp 15541F Forward Mitochondrion CR JEMU_RBINS CGTCGTGCATTAATGGTTTGC Canidae DNADD Malmström 2005 Molecular Biology and Evolution 22: 2040-2047 ca 150 bp 15578R Reverse Mitochondrion CR JEMU_RBINS CTTATATGCATGGGGCAAA Canidae DNADD Lee et al 2015 PONE 10.1371/journal.pone.0125759 ca 150 bp 15583R Reverse Mitochondrion CR JEMU_RBINS ACATGCTTATATGCATGGG Canidae DNADD Lee et al 2015 PONE 10.1371/journal.pone.0125759 ca 150 bp 15657F Forward Mitochondrion CR JEMU_RBINS ATGCATATCACTTAGTCCA Canidae DNADD Lee et al 2015 PONE 10.1371/journal.pone.0125759 ca 150 bp 15692R Reverse Mitochondrion CR JEMU_RBINS CATGGTGATTAAGCCCTTATTGGA Canidae DNADD Malmström 2005 Molecular Biology and Evolution 22: 2040-2047 ca 150 bp 15837R Reverse Mitochondrion CR JEMU_RBINS AGTAGGATTGGAGTAAATA Canidae DNADD Lee et al 2015 PONE 10.1371/journal.pone.0125759 ca 150 bp 16H10 Reverse Mitochondrion 16S JEMU_RBINS AATCCTTTCGTACTAAA Decapoda GTIGoussanou "Schubart, Christoph. (2009). Mitochondrial DNA and decapod phylogenies; The importance of pseudogenes and primer optimization. Crustacean Issues. 18. 47-65. " longer than 1472 16H37 Forward Mitochondrion 16S JEMU_RBINS CCGGTYTGAACTCAAATCATGT Decapoda GTIGoussanou2 Klaus 2006 516bp with 16L29 16HLeu Reverse Mitochondrion 16S JEMU_RBINS CATATTATCTGCCAAAATAG Decapoda GTIGoussanou "Schubart, Christoph. (2009). Mitochondrial DNA and decapod phylogenies; The importance of pseudogenes and primer optimization. Crustacean Issues. 18. 47-65. " longer than 1472 16L12 Forward Mitochondrion 16S JEMU_RBINS TGACCGTGCAAAGGTAGGATAA Decapoda GTIGoussanou Schubart et al. (1998) 450bp 52°C 16L29 Forward Mitochondrion 16S JEMU_RBINS YGCCTGTTTATCAAAAACAT Decapoda GTIGoussanou Schubart et al. (2001) as 16L2 570 45°C to replace 16L2 16S_V1_120R Reverse Mitochondrion 16S rRNA TTACTCACCCGTICGCCRCT Human aDNA_Tournai Adler 2013 16S_V1_8F Forward Mitochondrion 16S rRNA AGAGTTTGATYMTGGCTCAG Human aDNA_Tournai Adler 2013 16S_V3_338F Forward Mitochondrion 16S rRNA ACTCCTACGGGAGGCAGCAGT Human aDNA_Tournai Adler 2013 16S_V3_533R Reverse Mitochondrion 16S rRNA TTACCGCGGCTGCTGGCAC Human aDNA_Tournai Adler 2013 16S_V6_1046R Reverse Mitochondrion 16S rRNA CGACARCCATGCASCACCT Human aDNA_Tournai Adler 2013 16S_V6_926F Forward Mitochondrion 16S rRNA AAACTYAAAKGAATTGACGGG Human aDNA_Tournai Adler 2013 16S-3endfwHym Forward Mitochondrion 16S JEMU_RBINS attaaccctgatacaaaaggta Bees HeteroplasHym adapted by Sonet unpublished 16S-5endfwHym Forward Mitochondrion 16S JEMU_RBINS acgctgttatccctaaggta Bees HeteroplasHym adapted by Sonet unpublished 16SA Reverse Mitochondrion 16S Zoltan Nagy CGCCTGTTTATCAAAAACAT NA ZTN Simon_et_al_1991 NA NA 16SA Forward Mitochondrion 16S EVA CGCCTGTTTATCAAAAACAT NA Oonopidae Simon_et_al_1991 NA NA 16SA_Hym Forward Mitochondrion 16S_rDNA JEMU TRACTGTRCAAAGGTAGC Hymenoptera Abia_Athalia NA NA NA 16SA-L Forward Mitochondrion 16S JEMU_RBINS CGCCTGTTTATCAAAAACAT Anura Werneria Palumbi et al. 1991 16Sar Reverse Mitochondrion 16S rDNA Malacology_RBINS CGCCTGTTTAACAAAAACAT Invertebrates "Simon et al., 1994, Ann. Entomol. Soc. Am., 87(6):651-701; Palumbi et al.,1991, A simple fool’s guide to PCR (vers. 2.0) modified!" 16SAR-L-F Forward Mitochondrion 16S JEMU_RBINS (aliquot) CGCCTGTTTATCAAAAACAT Annelida Cryoli "Palumbi S, Martin A, Romano S, MacMillan WO, Stice L, Grabowski G. 1991 The Simple Fool's Guide to PCR, Ver. 2.0. Department of Zoology, Kewalo Marine Laboratory, University of Hawaii, Honolulu." 480bp 16SAR-L-F Forward Mitochondrion 16S JEMU_RBINS CGCCTGTTTATCAAAAACAT Annelida Cryoli "Palumbi S, Martin A, Romano S, MacMillan WO, Stice L, Grabowski G. 1991 The Simple Fool's Guide to PCR, Ver. 2.0. Department of Zoology, Kewalo Marine Laboratory, University of Hawaii, Honolulu." 480bp 16SAR-L-F Forward Mitochondrion 16S Patrick Martin CGCCTGTTTATCAAAAACAT Palumbi 1996 16SB Reverse Mitochondrion 16S EVA CTCCGGTTTGAACTCAGATCA NA Oonopidae Simon_et_al_1991 NA NA 16Sb Forward Mitochondrion 16S JEMU_RBINS CTCCGGTTTGAACTCAGATCA Mantis ManTiS Svenson and Whiting 2004 Palumbi et al 1991 16SB_Hym Reverse Mitochondrion 16S_rDNA JEMU TTAATTCAACATCGAGGTC Hymenoptera Abia_Athalia NA NA NA 16SB-H Reverse Mitochondrion 16S JEMU_RBINS CCGGTCTGAACTCAGATCACGT Anura Werneria Palumbi et al. 1991 16Sbr Forward Mitochondrion 16S Zoltan Nagy CCGGTYTGAACTCAGATCAYGT NA ZTN Simon_et_al_1991 NA NA 16Sbr Forward Mitochondrion 16S rDNA Malacology_RBINS CCGGTCTGAACTCAGATCACGT Invertebrates "Simon et al., 1994, Ann. Entomol. Soc. Am., 87(6):651-701; Palumbi et al.,1991, A simple fool’s guide to PCR (vers. 2.0) modified!" 16Sbr-H Reverse Mitochondrion 16S Patrick Martin CCGGTCTGAACTCAGATCACGT Palumbi 1996 16SBRH-R Reverse Mitochondrion 16S JEMU_RBINS (aliquot) CCGGTCTGAACTCAGATCACGT Annelida Cryoli "Palumbi S, Martin A, Romano S, MacMillan WO, Stice L, Grabowski G. 1991 The Simple Fool's Guide to PCR, Ver. 2.0. Department of Zoology, Kewalo Marine Laboratory, University of Hawaii, Honolulu." 480bp 16SBRH-R Reverse Mitochondrion 16S JEMU_RBINS CCGGTCTGAACTCAGATCACGT Annelida Cryoli "Palumbi S, Martin A, Romano S, MacMillan WO, Stice L, Grabowski G. 1991 The Simple Fool's Guide to PCR, Ver. 2.0. Department of Zoology, Kewalo Marine Laboratory, University of Hawaii, Honolulu." 480bp 16SF Forward Mitochondrion 16S EVA TTGGCCTGTTTATCAAAAACATG NA NA LRN13398 NA NA 16Sf.dip Forward Mitochondrion 16S JEMU CGCCTGTTTAACAAAAACAT Diptera BC42W "Kutty et al., 2007, Cladistics, 23: 6483" NA NA 16Sf.dipt Forward Mitochondrion 16S JEMU TGTAAAACGACGGCCAGTCGCCTGTTTAACAAAAACAT Diptera Diptera 16Souter Reverse Mitochondrion 16S_rDNA JEMU CTTATTCAACATCGAGGTC Hymenoptera Abia_Athalia Whitfield_1997 NA NA 16SR Reverse Mitochondrion 16S EVA CTTACGCCGGTCTGAACTCAG NA NA LRN12866_(12881) NA NA 16Sr.dip Reverse Mitochondrion 16S JEMU TGAACTCAGATCATGTAAGAAA Diptera BC42W "Kutty et al., 2007, Cladistics, 23: 6483" NA NA 16Sr.dipt Reverse Mitochondrion 16S JEMU CAGGAAACAGCTATGACTGAACTCAGATCATGTAAGAAA Diptera Diptera 16SXiF Forward Nucleus 16S JEMU CGCTGTTATCCCTAAGGTAA Diptera:Sarcophagidae NICC "Xinghuo et al., 2010 Romanian Journal of Legal Medicine 1: 4350 or Li et al., 2010, Tropical Biomedicine 27: 155166) (250289 bp fragment)" 16SXiR Reverse Nucleus 16S JEMU CTGGTATGAAAGGTTTGACG Diptera:Sarcophagidae NICC "Xinghuo et al., 2010 Romanian Journal of Legal Medicine 1: 4350 or Li et al., 2010, Tropical Biomedicine 27: 155166) (250289 bp fragment)" 18S1F Forward Nucleus 18S EVA TACCTGGTTGATCCTGCCAGTAG NA Oonopidae Giribet_et_al_1996 NA NA 18S1F Forward Nucleus 18S JEMU_RBINS TACCTGGTTGATCCTGCCAGTAG universal MolChaRE Giribet et al. 1996 18S-1FPM Forward Nucleus 18S Patrick Martin TACCTGGTTGATCCTGCCAGTAG 18S-1RPM Reverse Nucleus 18S Patrick Martin GATCCTTCCGCAGGTTCACCTAC 18S2F Forward Nucleus 18S JEMU AGGGTTCGATTCCGGAGAGGGAGC SYRPHIDS 18S-2FPM Forward Nucleus 18S Patrick Martin GGTGCCAGCAGCCGCGGTAATTC 18S-2RPM Reverse Nucleus 18S Patrick Martin TCTGATCGTCTTCGAACCTCTG 18S3F Forward Nucleus 18S EVA GTTCGATTCCGGAGAGGGA NA Oonopidae Giribet_et_al_1996 NA NA 18S3F Forward Nucleus 18S JEMU_RBINS GTTCGATTCCGGAGAGGGA universal MolChaRE Giribet et al. 1996 18S3F Forward Nucleus 18S Patrick Martin TAGTCATATGCTTGTCTCAAAGA 18S5R Reverse Nucleus 18S EVA CTTGGCAAATGCTTTCGC NA Oonopidae NA NA NA 18S5R Reverse Nucleus 18S JEMU_RBINS CTTGGCAAATGCTTTCGC universal MolChaRE Whiting et al. 1997 18S5R Reverse Nucleus 18S Patrick Martin CTACGGAAACCTTCTACGAGTTTTAC 18S9R Reverse Nucleus 18S EVA GATCCTTCCGCAGGTTCACCTAC NA Oonopidae Giribet_et_al_1996 NA NA 18S9R Reverse Nucleus 18S JEMU_RBINS GATCCTTCCGCAGGTTCACCTAC universal MolChaRE Whiting et al. 1997 18S-A Forward Nucleus 18S JEMU_RBINS AACCTGGTTGATCCTGCCAGT Decapoda GTIGoussanou Medlin et al. (1988) 18Sa0.7 Forward Nucleus 18S JEMU_RBINS ATTAAAGTTGTTGCGGTT Mantis ManTiS Whiting 1997 18SA2.0 Forward Nucleus 18S JEMU_RBINS ATGGTTGCAAAGCTGAAAC universal MolChaRE Giribet et al. 1996 18SA20 NA Nucleus 18S EVA ATGGTTGCAAAGCTGAAAC NA Oonopidae Whiting_et_al_1997 NA NA 18Sai Forward Nucleus 18S JEMU_RBINS CCTGAGAAACGGCTACCACATC Mantis ManTiS Whiting 1997 18Sal.O Forward Nucleus 18S JEMU_RBINS GGTGAAATTCTTGGACCGTC Mantis ManTiS Whiting 1997 18S-B Reverse Nucleus 18S JEMU_RBINS TGATCCTTCCGCAGGTTCACCT Decapoda GTIGoussanou Medlin et al. (1988) 18Sb0.5 Reverse Nucleus 18S JEMU_RBINS GTTTCAGCTTTGCAACCAT Mantis ManTiS Whiting 1997 18SB2.9R Reverse Nucleus 18S JEMU TATCTGATCGCCTTCGAACCTCT SYRPHIDS 18Sb3.0 Reverse Nucleus 18S JEMU_RBINS GACGGTCCAACAATTTCACC Mantis ManTiS Whiting 1997 18Sb5.0 Reverse Nucleus 18S JEMU_RBINS TAACCGCAACAACTTTAAT Mantis ManTiS Whiting 1997 18SBI NA Nucleus 18S EVA GAGTCTCGTTCGTTATCGGA NA Oonopidae Whiting_et_al_1997 NA NA 18SBI Reverse Nucleus 18S JEMU_RBINS GAGTCTCGTTCGTTATCGGA universal MolChaRE Whiting et al. 1997 18S-C Forward Nucleus 18S JEMU_RBINS CGGTAATTCCAGCTCCAATAG Decapoda GTIGoussanou Apakupakul et al. (1999) 18SF Forward Nucleus 18S JEMU CATATCCGAGGCCCTGTAAT Diptera BC42W NA NA NA 18Sr Reverse Nucleus 18S JEMU AGTTTTCCCGTGTTGAGTCA Diptera BC42W NA NA NA 18SSYR1F Forward Nucleus 18S JEMU GGGAGCCTGAGAAACGGCTACC SYRPHIDS 18SSYR2R Reverse Nucleus 18S JEMU CGAACCTCTAACTTTCGTTC SYRPHIDS 18S-Y Reverse Nucleus 18S JEMU_RBINS CAGACAAATCGCTCCACCAAC Decapoda GTIGoussanou Apakupakul et al. (1999) 1F Forward Mitochondrion CR JEMU_RBINS TTTAAACTATTCCCTGACGCTTA Cervidae DNADD Valenzuela et al 2016 50°C 1R Reverse Mitochondrion CR JEMU_RBINS AAGCATGGGGTATATGTAATGT Cervidae DNADD Valenzuela et al 2016 50°C 262098F forward Nucleus gibbosus_dimorphism_pos 265 to 280 JEMU_RBINS TACTCTAGGTGGACGGGTTGCATCA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 262098 no mismatches "270,267 F" Forward Nucleus gibbosus_downstream_target_region JEMU_RBINS AGTTTTGCGGCACACATCAC Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS "272,857 F" Forward Nucleus gibbosus_downstream_target_region JEMU_RBINS GACTGACGCCTGTTCCTGAA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 276007F forward Nucleus gibbosus_dimorphism_pos 280 to 295 JEMU_RBINS TCCCAGTCTTTCGTTTCCTCTCCCT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 276007 no mismatches 279400F forward Nucleus gibbosus_dimorphism_pos 280 to 295 JEMU_RBINS ACCATTTCCCCCTTTTTGTCCGACA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 279400 no mismatches 279948F forward Nucleus gibbosus_dimorphism_pos 280 to 295 JEMU_RBINS GTTAGTTTCCCCGATACGTCCGGTG Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 279948 no mismatches 280460R reverse Nucleus gibbosus_dimorphism_pos 280 to 295 JEMU_RBINS ACGACCGACAAATTACTCCAGCTGG Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 280436 no mismatches 281275R reverse Nucleus gibbosus_dimorphism_pos 280 to 295 JEMU_RBINS TGAGCTGTCAGAGAAAGACCCGGTA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 281251 no mismatches 286010F Forward Nucleus gibbosus_target_region JEMU_RBINS CCTGCATTTCCTCGGATAGGT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches "288,914 R" Reverse Nucleus gibbosus_downstream_target_region JEMU_RBINS TTTTCTCCCCACAGCGAGTC Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS "289,202 R" Reverse Nucleus gibbosus_downstream_target_region JEMU_RBINS AGCCGCAACCAAATATCCCA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS "289,631 R" Reverse Nucleus gibbosus_downstream_target_region JEMU_RBINS TAGAAAACGTGCCGCCTCAT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 28D2H Reverse Nucleus 28S JEMU_RBINS TGACTCGCACACATGTTAGA Decapoda GTIGoussanou Mock and Schubart(2021) 750bp 56°C 28E Reverse Nucleus 28S JEMU CCTTATCCCGAAGTTACG Diptera BC42W Wiegmann_et_al_2000_AnnEntSocAM NA NA 28F Forward Nucleus 28S_rDNA JEMU TTAGTAGGGGCGACCGAACAGGGAT Amphipods BARCOLYS Hou_et_al_2009 NA NA 28H Reverse Nucleus 28S JEMU GGTTTCGCTGGATAGTAG Diptera BC42W Wiegmann_et_al_2000_AnnEntSocAM NA NA 28K Reverse Nucleus 28S JEMU CTTCGATGTCGGCTCTTG Diptera BC42W Wiegmann_et_al_2000_AnnEntSocAM NA NA 28L1 Forward Nucleus 28S JEMU_RBINS CGGAGGAAAAGAAACCAACAG Decapoda GTIGoussanou Mock and Schubart(2021) 750bp 56°C 28R Reverse Nucleus 28S_rDNA JEMU GTCTTTCGCCCCTATGCCCAACTGA Amphipods BARCOLYS Hou_et_al_2010 NA NA 28S_D2F Forward Nucleus 28S_rDNA JEMU CGTGTTGCTTGATAGTGCAGC sawflies ECES_PSEU Schmidt_et_al_2006 NA NA 28S_D2R Reverse Nucleus 28S_rDNA JEMU TTGGTCCGTGTTTCAAGACGG sawflies ECES_PSEU Schmidt_et_al_2006 NA NA 28S_rD5aCARPLAT Reverse Nucleus 28S_rDNA Frederik_Hendrickx GGYGTTGGTTGCTTAAGACAG Platynini_(Carabidae) NA Cryan_et_al_2001 NA nuclear 28S_rD6bCARPLAT Reverse Nucleus 28S_rDNA Frederik_Hendrickx AACCRGATTCCCTTTCGCC Platynini_(Carabidae) NA Cryan_et_al_2001 NA nuclear 28S_stena_F1_A Forward Nucleus 28S JEMU_RBINS GAGTTCAAGAGAACGTGAAACTACCA Isopoda/Stenasellidae SideIsopodaPM Morvan et al 2016 28S_stena_R1 Reverse Nucleus 28S JEMU_RBINS CCTATACCCAGCTCTGACGATCG Isopoda/Stenasellidae SideIsopodaPM Morvan et al 2017 28S28C-R Reverse Nucleus 28S JEMU GCTATCCTGAGGGAAACTTCGG SYRPHIDS 28S32A NA Nucleus 28S EVA AGTACGTGAAACCGTTCASGGGT NA Oonopidae NA NA NA 28S3311F Forward Nucleus 28S_rDNA JEMU GGGACTACCCCCTGAATTTAAGCAT Amphipods BARCOLYS NA NA NA 28S4434R Reverse Nucleus 28S_rDNA JEMU CCAGCTATCCTGAGGGAAACTTCG Amphipods BARCOLYS NA NA NA 28SA NA Nucleus 28S EVA GACCCGTCTTGAAGCACG NA Oonopidae Whiting_et_al_1997 NA NA 28Sa Forward Nucleus 28S_rDNA JEMU TTGGCGACCCGCAATTTAAGCAT Amphipods BARCOLYS Hou_et_al_2007 NA NA 28Sa Forward Nucleus 28S JEMU_RBINS GACCCGTCTTGAAACACGGA Mantis ManTiS De Ley et al 1999 alias D3B 28SA Forward Nucleus 28S JEMU_RBINS GACCCGTCTTGAAACACG Mantis ManTiS Whiting 2002 De Ley et al 1999 alias D3B 28SaCARPLAT NA Nucleus 28S_rDNA Frederik_Hendrickx GACCCGTCTTGAAACACGGA Platynini_(Carabidae) NA Cryan_et_al_2001 NA nuclear 28SB NA Nucleus 28S EVA TCGGAAGGAACCAGCTACTA NA Oonopidae Whiting_et_al_1997 NA NA 28Sb Reverse Nucleus 28S_rDNA JEMU CCTGAGGGAAACTTCGGAGGGAAC Amphipods BARCOLYS Hou_et_al_2008 NA NA 28SB Reverse Nucleus 28S JEMU_RBINS TCGGAAGGAACCAGCTAC Mantis ManTiS Whiting 2002 Nunn 1992 alias D3B 28SbCARPLAT NA Nucleus 28S_rDNA Frederik_Hendrickx TCGGAAGGAACCAGCTACTA Platynini_(Carabidae) NA Cryan_et_al_2001 NA nuclear 28SBOUT NA Nucleus 28S EVA CCCACAGCGCCAGTTCTGCTTACC NA Oonopidae NA NA NA 28SC NA Nucleus 28S EVA GGTTCGATTAGTCTTTCGCC NA Oonopidae Maddison_&_Hedin_2001 NA NA 28SC1’-F Forward Nucleus 28S JEMU_RBINS (aliquot) ACCCGCTGAATTTAAGCAT Annelida Cryoli "Jamieson, B.G.M., Tillier, S., Tillier, A., Justine, J.-L., Ling, E., James, S., MacDonald, K. & Hugall, A.F. (2002) Phylogeny of the Megascolecidae and Crassiclitellata (Annelida, Oligochaeta): combined versus partitioned analysis using nuclear (28S) and mitochondrial (12S, 16S) rDNA. Zoosystema, 24, 707–734." 330bp 28SC1’-F Forward Nucleus 28S JEMU_RBINS ACCCGCTGAATTTAAGCAT Annelida Cryoli "Jamieson, B.G.M., Tillier, S., Tillier, A., Justine, J.-L., Ling, E., James, S., MacDonald, K. & Hugall, A.F. (2002) Phylogeny of the Megascolecidae and Crassiclitellata (Annelida, Oligochaeta): combined versus partitioned analysis using nuclear (28S) and mitochondrial (12S, 16S) rDNA. Zoosystema, 24, 707–734." 330bp 28SC2-R Reverse Nucleus 28S JEMU_RBINS (aliquot) TGAACTCTCTCTTCAAAGTTCTTTTC Annelida Cryoli "Lê, H.L.V., Lecointre, G., Perasso, R., 1993. A 28S rRNA based phylogeny of the Gnathostomes: first steps in the analysis of conflict and congruence with morphologically based cladograms. Mol. Phyl. Evol. 2, 31–51." 330bp 28SC2-R Reverse Nucleus 28S JEMU_RBINS TGAACTCTCTCTTCAAAGTTCTTTTC Annelida Cryoli "Lê, H.L.V., Lecointre, G., Perasso, R., 1993. A 28S rRNA based phylogeny of the Gnathostomes: first steps in the analysis of conflict and congruence with morphologically based cladograms. Mol. Phyl. Evol. 2, 31–51." 330bp 28SD1CARHARP NA Nucleus 28S_rDNA Frederik_Hendrickx GGGAGGAAAAGAAACTAAC Harpalus NA Ober_2004 NA nuclear 28SD3CARHARP NA Nucleus 28S_rDNA Frederik_Hendrickx GCATAGTTCACCATCTTTC Harpalus NA Ober_2004 NA nuclear 28SFAAB Forward Nucleus 28S Patrick Martin CCCGCTGAATTTAAGCATA 28SfGink Forward Nucleus 28S Jemu GACCAAGGAGTCTAACATGTGC Termites DAG Inward_et_al_2009 NA NA 28SfHux Forward Nucleus 28S Jemu ACACGGACCAAGGAGTCTAAC Termites DAG Inward_et_al_2007 NA NA 28SfMB2 Forward Nucleus 28S Jemu TCTAACATGTGCGCGAGTC Termites DAG Inward_et_al_2008 NA NA 28SO NA Nucleus 28S EVA GAAACTGCTCAAAGGTAAACGG NA Oonopidae Maddison_&_Hedin_2001 NA NA 28SRAAB Reverse Nucleus 28S Patrick Martin TCAGAATCGCTGCGGACCTCCACCA 28Src28AF Forward Nucleus 28S JEMU AGCGGAGGAAAAGAAAC SYRPHIDS 28SRD1A NA Nucleus 28S EVA CCCSCGTAAYTTAGGCATAT NA Oonopidae Edgecombe_&_Giribet_2006 NA NA 28SRD48A NA Nucleus 28S EVA ACCTATTCTCAAACTTTAAATGG NA Oonopidae Schwendinger_&_Giribet_2005 NA NA 28SRD4B Reverse Nucleus 28S EVA CCTTGGTCCGTGTTTCAAGAC NA Oonopidae Edgecombe_&_Giribet_2006 NA NA 28SRD7B1 NA Nucleus 28S EVA GACTTCCCTTACCTACAT NA Oonopidae Schwendinger_&_Giribet_2005 NA NA 28SrGPW2 Reverse Nucleus 28S Jemu GCAACCAACGCCTTTCA Termites DAG Inward_et_al_2011 NA NA 28SrGPW3 Reverse Nucleus 28S Jemu TTAACCCGGCGTTTGGTTC Termites DAG Inward_et_al_2012 NA NA 28SrWin Reverse Nucleus 28S Jemu GTCCTGCTGTCTTAAGCAACC Termites DAG Inward_et_al_2010 NA NA 28SSYR1F Forward Nucleus 28S JEMU GGAACCAGCTACTAGATGGTTCG SYRPHIDS 28SSYR2R Reverse Nucleus 28S JEMU GCGAAAAGAAATCAGTTCAGC SYRPHIDS 28SZX1 NA Nucleus 28S EVA ACCCGCTGAATTTAAGCATAT NA Oonopidae van_der_Auwera_et_al_1994 NA NA 28Z Reverse Nucleus 28S JEMU GCAAAGGATAAGCTTCGATGG Diptera BC42W Wiegmann_et_al_2000_AnnEntSocAM NA NA 290287F Forward Nucleus gibbosus_homo_gap_291k_outout JEMU_RBINS CCAGCAATTTGGGAGGGGAT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 290640F Forward Nucleus gibbosus_homo_gap_291k_outout JEMU_RBINS TGTGAARGTCRTGAGTGGGA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS degenerated 1-2 mut in middle 291295R Reverse Nucleus gibbosus_homo_gap_291k_outout JEMU_RBINS ACCTGCCCAAATAAACTTTACACT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 1-2 mismatches in middle 291858R Reverse Nucleus gibbosus_homo_gap_291k_outout JEMU_RBINS ACACAGCACAAGGGGAAYAT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS degenerated one mut at 3' 292120R Reverse Nucleus gibbosus_homo_gap_291k_outout JEMU_RBINS TTATTGTGCACAGCGCTTGG Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS missing GC at 3'end 293288F Forward Nucleus gibbosus_hetero_gap_293k_outout JEMU_RBINS TGACAGTCATAAAGCTCTGTTRAA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS degenerated 3' 293731R Reverse Nucleus gibbosus_hetero_gap_293k_outout JEMU_RBINS AAAGCGCGGGAAGGATGTAT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 293736R Reverse Nucleus gibbosus_hetero_gap_293k_outout JEMU_RBINS GTATCAAAGCGCGGGAAGGA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 293962F forward Nucleus gibbosus_dimorphism_pos 295 to 310 JEMU_RBINS GGGGTTTTGTCAAATGCGCATGGAT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 293962 no mismatches 294658F forward Nucleus gibbosus_dimorphism_pos 295 to 310 JEMU_RBINS TCCGCGGTCGAATCCCAAACAATAA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 294658 no mismatches 295055R reverse Nucleus gibbosus_dimorphism_pos 295 to 310 JEMU_RBINS CGGTGAAAACGGCTTGCTGAAACTT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 295031 no mismatches 296051R reverse Nucleus gibbosus_dimorphism_pos 295 to 310 JEMU_RBINS TTGTATCAAAGCGCGGGAAGGATGT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 296027 no mismatches 296339F Forward Nucleus gibbosus_hetero_gap_297k_outout JEMU_RBINS TAATTCGGAGAAGGCTCGCC Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 1-2 mismatches in middle 296395F Forward Nucleus gibbosus_hetero_gap_297k_outout JEMU_RBINS CGAGGCGTTGGTTTGAAAGG Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 296679F Forward Nucleus gibbosus_hetero_gap_297k_inout JEMU_RBINS AGAACGGAATGGAAGCGAGT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 1-2 mismatches at 5' 296682F Forward Nucleus gibbosus_hetero_gap_297k_inout JEMU_RBINS ACGGAATGGAAGCGAGTTCT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 1-2 mismatches at 5' 296698F Forward Nucleus gibbosus_hetero_gap_297k_inout JEMU_RBINS TTCTTGAGAAGTCCCTGGCC Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 1-2 mismatches at 5' "297,721 F" Forward Nucleus gibbosus_upstream_target_region JEMU_RBINS AAGTTCTGCCTGATCCCACG Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 297325F Forward Nucleus gibbosus_hetero_gap_297k_inin JEMU_RBINS TGTCAGTTCAGCTCTTCCGT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 297337F Forward Nucleus gibbosus_hetero_gap_297k_inin JEMU_RBINS GCTCTTCCGTTTCAAAGTGACG Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 297744R reverse Nucleus gibbosus_dimorphism_pos 280 to 295 JEMU_RBINS CAGTCGTGGGATCAGGCAGAACTTT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 297720 no mismatches 297760R Reverse Nucleus gibbosus_hetero_gap_297k_inout JEMU_RBINS CGCGAGCCAAACGATCAAAA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 297771R Reverse Nucleus gibbosus_hetero_gap_297k_inout JEMU_RBINS CGTAAAAACAACGCGAGCCA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 297787R Reverse Nucleus gibbosus_hetero_gap_297k_inin JEMU_RBINS CGATCCCTACCCCACTCGTA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches "298,407 F" Forward Nucleus gibbosus_upstream_target_region JEMU_RBINS ATCGTGGAAGGAGGCGTTTT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 298028R Reverse Nucleus gibbosus_hetero_gap_297k_outout JEMU_RBINS AGCTTGGAAGGGAAGCAAGA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 29F Forward Nucleus ITS JEMU_RBINS AAAGTCGTAACAAGGTTTCCGTA Clitellata (annelids) SideHaplotaxis Liu & Erseu 2017 301048R Reverse Nucleus gibbosus_target_region JEMU_RBINS CCCCCACAGACACACTTACC Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 301160R Reverse Nucleus gibbosus_target_region JEMU_RBINS CAACAATCATCCCACCCCGA Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 302382R Reverse Nucleus gibbosus_target_region JEMU_RBINS AGAAGTAGGGGAGGCTGAGG Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 308648F forward Nucleus gibbosus_dimorphism_pos 310 to 325 JEMU_RBINS CCCTCCGAGTACTTTTTCGACACCC Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 308648 no mismatches "313,461 R" Reverse Nucleus gibbosus_dimorphism_pos 265 to 280 JEMU_RBINS TTTCCTTCGGTGCTACGCTT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS no mismatches 313709R reverse Nucleus gibbosus_dimorphism_pos 310 to 325 JEMU_RBINS AGAGAGCGCAGGGAAAGGAAAAGTC Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 313685 no mismatches 313912R reverse Nucleus gibbosus_dimorphism_pos 310 to 325 JEMU_RBINS AGGGAGGAGGGTGAAGTGTCAGTAC Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 313888 no mismatches "316,070 R" Reverse Nucleus gibbosus_upstream_target_region JEMU_RBINS ATGCGCTTTTTCTTTGSCGT Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS degenerated 1 mismatch 325305R reverse Nucleus gibbosus_upstream_target_region JEMU_RBINS ACTCCTTCTCGCCCTCGTGAAAATG Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 325281 no mismatches 327059R reverse Nucleus gibbosus_dimorphism_pos JEMU_RBINS ACCGTCTTTAAGGGGTTAAGGCAGC Oedothorax_gibbosus Reseq_gibbosus unpublished - designed by GS 327035 no mismatches 3F Forward Nucleus 18Sa Frederik_Hendrickx GTTCGATTCCGGAGAGGGA none NA Gibiret_et_al_1996 NA nuclear 421-F Forward Nucleus 18S JEMU_RBINS AAACGGCTACCACATCCAAG Holothuroidea SideEchino Lacey et al. 2005 381 - 396 4F Forward Mitochondrion CR JEMU_RBINS ACATTACATTATATACCCCATGCTT Cervidae DNADD Valenzuela et al 2016 59°C 4fb-F Forward Nucleus 18S JEMU_RBINS (aliquot) CCAGCAGCCGCGGTAATTCCAG Annelida Cryoli 1750bp 4fb-F Forward Nucleus 18S JEMU_RBINS CCAGCAGCCGCGGTAATTCCAG Annelida Cryoli 1750bp 4fbk-R Reverse Nucleus 18S JEMU_RBINS (aliquot) CTGGAATTACCGCGGCTGCTGG Annelida Cryoli 1750bp 4fbk-R Reverse Nucleus 18S JEMU_RBINS CTGGAATTACCGCGGCTGCTGG Annelida Cryoli 1750bp 5.8mussF Forward Nucleus ITS JEMU_RBINS (aliquot) CGCAGCCAGCTGCGTGAATTAATGT Annelida Cryoli "M. Källersjö, T. von Proschwitz, S. Lundberg, P. Eldenäs, C. Erséus 2005 Evaluation of ITS rDNA as a complement to mitochondrial gene sequences for phylogenetic studies in freshwater mussels: an example using Unionidae from North-Western Europe Zool. Scr., 34 pp. 415–424" 5.8mussF Forward Nucleus ITS JEMU_RBINS CGCAGCCAGCTGCGTGAATTAATGT Annelida Cryoli "M. Källersjö, T. von Proschwitz, S. Lundberg, P. Eldenäs, C. Erséus 2005 Evaluation of ITS rDNA as a complement to mitochondrial gene sequences for phylogenetic studies in freshwater mussels: an example using Unionidae from North-Western Europe Zool. Scr., 34 pp. 415–424" 5.8mussR Reverse Nucleus ITS JEMU_RBINS (aliquot) GATGTCGATGTTCAATGTGTCCTGC Annelida Cryoli "M. Källersjö, T. von Proschwitz, S. Lundberg, P. Eldenäs, C. Erséus 2005 Evaluation of ITS rDNA as a complement to mitochondrial gene sequences for phylogenetic studies in freshwater mussels: an example using Unionidae from North-Western Europe Zool. Scr., 34 pp. 415–424" 5.8mussR Reverse Nucleus ITS JEMU_RBINS GATGTCGATGTTCAATGTGTCCTGC Annelida Cryoli "M. Källersjö, T. von Proschwitz, S. Lundberg, P. Eldenäs, C. Erséus 2005 Evaluation of ITS rDNA as a complement to mitochondrial gene sequences for phylogenetic studies in freshwater mussels: an example using Unionidae from North-Western Europe Zool. Scr., 34 pp. 415–424" 5.8SF Forward Nucleus 5.8S Patrick Martin CGCAGCCAGCTGCGTGAATTAATGT 5.8SR Reverse Nucleus 5.8S Patrick Martin GATGTCGATGTTCAATGTGTCCTGC 5R Reverse Mitochondrion CR JEMU_RBINS CACCACAGTTATGTGTGAGCA Cervidae DNADD Valenzuela et al 2016 59°C 600F Forward Nucleus 18S JEMU_RBINS (aliquot) GGTGCCAGCMGCCGCGGT Annelida Cryoli "Norén, M. & Jondelius, U. (1999) Phylogeny of the Prolicithophora (Platyhelminthes) inferred from 18S rDNA sequences. Cladistics, 15, pp. 103–112" 1750bp 600F Forward Nucleus 18S JEMU_RBINS GGTGCCAGCMGCCGCGGT Annelida Cryoli "Norén, M. & Jondelius, U. (1999) Phylogeny of the Prolicithophora (Platyhelminthes) inferred from 18S rDNA sequences. Cladistics, 15, pp. 103–112" 1750bp 606F Forward Nucleus ITS JEMU_RBINS GTCGATGAAGAGCGCAGCCA Clitellata (annelids) SideHaplotaxis Liu & Erseu 2017 660F Forward Nucleus 18S JEMU_RBINS (aliquot) GATCTCGGGTCCAGGCT Annelida Cryoli "Erséus, C., Källersjö, M., Ekman, M. & Hovmöller, R. (2002) 18S rDNA phylogeny of the Tubificidae (Clitellata) and its constituent taxa: dismissal of the Naididae. Mol. Phylogen. Evol., 22: 414–422" 1750bp 660F Forward Nucleus 18S JEMU_RBINS GATCTCGGGTCCAGGCT Annelida Cryoli "Erséus, C., Källersjö, M., Ekman, M. & Hovmöller, R. (2002) 18S rDNA phylogeny of the Tubificidae (Clitellata) and its constituent taxa: dismissal of the Naididae. Mol. Phylogen. Evol., 22: 414–422" 1750bp 698R Reverse Nucleus GAPDH JEMU_RBINS CAGGAGACSACATCRTCYTC Decapoda GTIGoussanou Liao et al. (2019) 85F Forward Nucleus GAPDH JEMU_RBINS ATGAAGCCWGARAACATTCCWTGG Decapoda GTIGoussanou Liao et al. (2019) 9R Reverse Nucleus 18Sb Frederik_Hendrickx GATCCTTCCGCAGGTTCACCTAC none NA Gibiret_et_al_1996 NA nuclear A20 NA Nucleus 18Sb Frederik_Hendrickx ATGGTTGCAAAGCTGAAAC none NA Whiting_et_al_1997 NA nuclear A2590 Reverse Mitochondrion COI JEMU GCTCCTATTGATARWACATARTGRAAATG sawfly ECES_PSEU Normark_et_al_1999 NA NA AATS244R Reverse Nucleus AATS JEMU CATNCCRCARTCNATRTGYTT SYRPHIDS AATS40F Forward Nucleus AATS JEMU GNATGAAYCARTTYAARCCNAT SYRPHIDS AATSSYR1F Forward Nucleus AATS JEMU GTTCAAGCCGATHTTYYTNGG SYRPHIDS AATSSYR3R Reverse Nucleus AATS JEMU GCAGTCCATGTGCTTYTTNGG SYRPHIDS aBelcan_10895_F Forward Nucleus aBelcan JEMU_RBINS ACTTGCCGCTGTACTCCTA Canids Canids aBelcan_11024_R Reverse Nucleus aBelcan JEMU_RBINS GCTTGTTATGATTATGCCTCA Canids Canids aBelcan_13594_F Forward Nucleus aBelcan JEMU_RBINS CCACGGGTAACTTCCATGAT Canids Canids aBelcan_13706_R Reverse Nucleus aBelcan JEMU_RBINS AGTGAAGAGGCTATGGGTATTG Canids Canids aBelcan_4293_F Forward Nucleus aBelcan JEMU_RBINS CAGGAATAATCCTACTAACATGACAA Canids Canids aBelcan_4433_R Reverse Nucleus aBelcan JEMU_RBINS TTTGATTTAGTCCGCCTCAG Canids Canids aBelcan_6218_F Forward Nucleus aBelcan JEMU_RBINS TCACCATATGTTTACCGTAGGA Canids Canids aBelcan_6307_R Reverse Nucleus aBelcan JEMU_RBINS TTTACTCCCGTTGGAATAGC Canids Canids aBelcan_8485_F Forward Nucleus aBelcan JEMU_RBINS GATTGGAGGGGCTACCTTAG Canids Canids aBelcan_8613_R Reverse Nucleus aBelcan JEMU_RBINS AAGGTAAAAACATAGGCTTGAA Canids Canids Actin5CF229 Forward Nucleus Actin EVA AAGTATCCNATTGAGCATGGTATTG NA Oonopidae Vink_et_al_2008 NA NA Actin5CR1057 Reverse Nucleus Actin EVA TTNGADATCCACATTTGTTGGAA NA Oonopidae Vink_et_al_2008 NA NA ActinF254 Forward Nucleus Actin EVA ACNAACTGGGATGATATGGAGAA NA Oonopidae Vink_et_al_2008 NA NA ActinR1009 Reverse Nucleus Actin EVA CCNCCRATCCANACGGARTACTT NA Oonopidae Vink_et_al_2008 NA NA AFDL1 Forward Mitochondrion D-loop JEMU_RBINS TTACACCATTATCGGCCAAATAG Elephants DIMAMAS Eggert 2002 used in Lee 2013 Journal of forensic and legal medicine 20.3 (2013): 174-178. AFDL2 Reverse Mitochondrion D-loop JEMU_RBINS TGACACATTGATTAAACAGTACTTGC Elephants DIMAMAS Eggert 2002 used in Lee 2013 Journal of forensic and legal medicine 20.3 (2013): 174-178. AFDL3 Forward Mitochondrion D-loop JEMU_RBINS CTTCTTAAACTATTCCCTGCAAGC Elephants DIMAMAS Eggert 2002 used in Lee 2013 Journal of forensic and legal medicine 20.3 (2013): 174-178. AFDL4 Reverse Mitochondrion D-loop JEMU_RBINS GTTGATGGTTTCTCGGAGGTAG Elephants DIMAMAS Eggert 2002 used in Lee 2013 Journal of forensic and legal medicine 20.3 (2013): 174-178. AMEL-as Reverse Nucleus Amelogenin JEMU_RBINS CACTATTCTTTACAGAGCCCAGG Human aDNA_Pacha Gibbon 2009 AMEL-Exon-2-A-R Reverse Nucleus Amelogenin IIIIIIIIIIACAGGCATGGCAAAAGCTG Human aDNA_Tournai Masuyama 2017 Sense primer sets AMEL-Exon-2-B-F Forward Nucleus Amelogenin TCAAGAAATGGGGACCTGGATT Human aDNA_Tournai Masuyama 2017 Antisense primer sets AMEL-fi Forward Nucleus Amelogenin JEMU_RBINS GGCACCCTGGTTATATCAACTTCA Human aDNA_Pacha Gibbon 2009 PCR2 : 188bp-X/194bp-Y AMEL-fwd Forward Nucleus Amelogenin JEMU_RBINS GTCTCTYYTAATGTKAACAATTGCAT Human aDNA_Pacha Gibbon 2009 PCR1 : 327bp-X/321bp-Y amelogenin_F Forward NA amelogenin JEMU CCCTGGGCTCTGTAAAGAATAGTG vertebrates/primates BarCoVer cf_Katerina_Guschanski NA 100_bp_long;_nuclear_+_det_sex_in_humans amelogenin_R Reverse NA amelogenin JEMU ATCAGAGCTTAAACTGGGAAGCTG vertebrates/primates BarCoVer cf_Katerina_Guschanski NA 100_bp_long;_nuclear_+_det_sex_in_humans AMEL-ri Reverse Nucleus Amelogenin JEMU_RBINS CCATCAGAGCTTAAACTGGGAAGC Human aDNA_Pacha Gibbon 2009 AMEL-rvs Reverse Nucleus Amelogenin JEMU_RBINS CCAACCATCAGAGCTTAAACTG Human aDNA_Pacha Gibbon 2009 AMEL-se Forward Nucleus Amelogenin JEMU_RBINS TGTKAACAATTGCATATTGACTTAATC Human aDNA_Pacha Gibbon 2009 "PCR2 : 199bp, 10 SNPs" AMELX-Exon-2-A Forward Nucleus Amelogenin X GGATTTTATTTGCCTGCCTCC Human aDNA_Tournai Masuyama 2017 56 Sense primer sets AMELX-Exon-2-B Reverse Nucleus Amelogenin X TGGCAAAAGCTGCTCCCAG Human aDNA_Tournai Masuyama 2017 56 Antisense primer sets AMELY-Exon-2-A Forward Nucleus Amelogenin Y IIIIGGATTTTGTTTGCCTGCCTTG Human aDNA_Tournai Masuyama 2017 60 Sense primer sets AMELY-Exon-2-B Reverse Nucleus Amelogenin Y IIIITGGCAAAAGCTGCTCCCAC Human aDNA_Tournai Masuyama 2017 60 Antisense primer sets AML Forward Forward Nucleus Amelogenin JEMU_RBINS ACCTCATCCTGGGCACCCTGG Human aDNA_Pacha Mohandesan 2004 AML Forward Forward Nucleus Amelogenin JEMU_RBINS ACCTCATCCTGGGCACCCTGG Human aDNA_Pacha Mohandesan 2004 Aliquot from boxADNA3 AML Reverse X Reverse Nucleus Amelogenin JEMU_RBINS TGAGTCAGAGTGGCCAGGCGG Human aDNA_Pacha Mohandesan 2004 252bp AML Reverse X Reverse Nucleus Amelogenin JEMU_RBINS TGAGTCAGAGTGGCCAGGCGG Human aDNA_Pacha Mohandesan 2004 252bp Aliquot from boxADNA3 AML Reverse Y Reverse Nucleus Amelogenin JEMU_RBINS TCAATCCGAATGGTCAGGCAG Human aDNA_Pacha Mohandesan 2004 258bp AML Reverse Y Reverse Nucleus Amelogenin JEMU_RBINS TCAATCCGAATGGTCAGGCAG Human aDNA_Pacha Mohandesan 2004 258bp Aliquot from boxADNA3 AmpF1 Forward NA NA JEMU ACAGGATATGATGARAAGCTTGT NA NA NA NA NA AmpR1 Reverse NA NA JEMU AACTCAGCTGCATTKCCAATRTCA NA NA NA NA NA Ann16SF Forward Mitochondrion 16S JEMU_RBINS (aliquot) GCGGTATCCTGACCGTRCWAAGGTA Annelida Cryoli "E. Sjölin, C. Erséus, M. Källersjö 2005 Phylogeny of Tubificidae (Annelida, Clitellata) based on mitochondrial and nuclear sequence data. Mol. Phylogenet. Evol., 35 431–441" 300bp Ann16SF Forward Mitochondrion 16S JEMU_RBINS GCGGTATCCTGACCGTRCWAAGGTA Annelida Cryoli "E. Sjölin, C. Erséus, M. Källersjö 2005 Phylogeny of Tubificidae (Annelida, Clitellata) based on mitochondrial and nuclear sequence data. Mol. Phylogenet. Evol., 35 431–441" 300bp Ann16SR Reverse Mitochondrion 16S JEMU_RBINS (aliquot) TCCTAAGCCAACATCGAGGTGCCAA Annelida Cryoli "E. Sjölin, C. Erséus, M. Källersjö 2005 Phylogeny of Tubificidae (Annelida, Clitellata) based on mitochondrial and nuclear sequence data. Mol. Phylogenet. Evol., 35 431–441" 300bp Ann16SR Reverse Mitochondrion 16S JEMU_RBINS TCCTAAGCCAACATCGAGGTGCCAA Annelida Cryoli "E. Sjölin, C. Erséus, M. Källersjö 2005 Phylogeny of Tubificidae (Annelida, Clitellata) based on mitochondrial and nuclear sequence data. Mol. Phylogenet. Evol., 35 431–441" 300bp ApCADfor4 Forward Nucleus CAD JEMU TGGAARGARGTBGARTACGARGTGGTYCG Bees incl. Halictinae Halictus "Danforth et al. 2006, Mol. Phy. Ev." Tm=57.8 %GC=41.4 Apcadfor4TAG1 Forward Nucleus cad JEMU_RBINS CTTTCCCTACACGACGCTCTTCCGATCTTGGAARGARGTBGARTACGARGTGGTYCG Halictidae Halictus ApCADrev4a Reverse Nucleus CAD JEMU GGCCAYTGNGCNGCCACYGTGTCTATYTGYTTNACC Bees incl. Halictinae Halictus "Danforth et al. 2006, Mol. Phy. Ev." Tm=65.1 %GC=47.2 Apcadrev4aTAG2 Reverse Nucleus cad JEMU_RBINS CTGGAGTTCAGACGTGTGCTCTTCCGATCTGGCCAYTGNGCNGCCACYGTGTCTATYTGY Halictidae Halictus ArgKfor2 Forward Nucleus ArgK arginine kinase JEMU GACAGCAARTCTCTGCTGAAGAA corbiculate Apinae Halictus Kawakita et al. 2008 Tm=50.2 %GC=43.5 ArgKrev2 Reverse Nucleus ArgK arginine kinase JEMU GGTYTTGGCATCGTTGTGGTAGATAC corbiculate Apinae Halictus Kawakita et al. 2008 Tm=54.4 %GC=46.2 ASP_f Forward Nucleus Asp JEMU TCAGAATTTACGATCTATTC Diptera:Sarcophagidae NICC ASP_R Reverse Nucleus Asp JEMU AACCTGTTCTTTGAGGABCC Diptera:Sarcophagidae NICC Auf-A Forward JEMU_RBINS TATATTACACCAACCCCAATC Trypanosom cruzi aDNA_Pacha Aufderheide (2004) Nested PCR 121/85bp Tm=52 Auf-B Reverse JEMU_RBINS ACTTTTGGGGCGGAAATTCAT Trypanosom cruzi aDNA_Pacha Aufderheide (2004) Nested PCR 121/85bp Tm=58 Auf-C Forward JEMU_RBINS CGAACCCCACCTCCCCGTAAA Trypanosom cruzi aDNA_Pacha Aufderheide (2004) Nested PCR 121/85bp Tm=66 Auf-D Reverse JEMU_RBINS GCGGAAATTCATGCATCTCCC Trypanosom cruzi aDNA_Pacha Aufderheide (2004) Nested PCR 121/85bp Tm=60 Aves_H534_556 Reverse Mitochondrion COI Jemu ACGAATAGGGGGGTTTGGTATTG birds BarCoVer JVH_(not_published) NA in_Tervuren Aves_H534_556d Reverse Mitochondrion COI Jemu ACGAATAGGGGGGTTTGRTAYTG birds BarCoVer JVH_(not_published) NA in_Tervuren Aves_L288_310 Forward Mitochondrion COI Jemu CGCATAAACAACATAAGCTTCTG birds BarCoVer JVH_(not_published) NA in_Tervuren Aves_L288_310d Forward Mitochondrion COI Jemu CGCATAAAYAACATAAGCTTYTG birds BarCoVer JVH_(not_published) NA in_Tervuren Aves_L501_523 Forward Mitochondrion COI Jemu ACCGCCATCAACATAAAACCCCC birds BarCoVer JVH_(not_published) NA in_Tervuren Aves_L501_523d Forward Mitochondrion COI Jemu ACCGCCATCAACATAAAACCNCC birds BarCoVer JVH_(not_published) NA in_Tervuren B1 NA Nucleus 18Sa Frederik_Hendrickx GAGTCTCGTTCGTTATCGGA none NA Whiting_et_al_1997 NA nuclear BarbeeF Forward Mitochondrion COI JEMU_RBINS CAACAAATCATAAAAATATTGG corbiculate bees Halictidae Françoso & Aria 2013 20–41 BatL5310 Forward Mitochondrion COI JEMU CCTACTCRGCCATTTTACCTATG rodent Demotroro NA NA NA BeeCox1F1 Forward Mitochondrion COI JEMU_RBINS TAGTCAACAAATCATAAAGATATTGG Bees Isebaf&Aculea Bleidorn2021 670 BeeCox1R2 Reverse Mitochondrion COI JEMU_RBINS CCAAATCCTGGTAGAATTAAAATATA Bees Isebaf&Aculea Anti-wolbachia primers 670 beewgFor Forward Nucleus Wingless JEMU_RBINS TGCACNGTSAAGACCTGYTGGATGAG Bees HalAfrEu Almeida et al. 2006 "Tannealing 58 beewgFor/Lep_wg2a: 94°C for 45 sec, 58""C for 45 sec, 72°C for 45 sec (35 cycles)." BGN-s1F2 Forward Nucleus JEMU_RBINS CGTGACTATAGGGGGAGGTC Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C BGN-s1R2 Reverse Nucleus JEMU_RBINS ACGCACGGGAAGACACAG Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Bird_H153_175d Reverse Mitochondrion COI JEMU ACGATTACRTTGTARATYTGRTC Birds BarCoVer JVH_(not_published) NA NA Bird_H153_175dt Reverse Mitochondrion COI JEMU CAGGAAACAGCTATGACACGATTACRTTGTARATYTGRTC Birds BarCoVer JVH_(not_published) NA NA Bird_H351_370d Reverse Mitochondrion COI JEMU CCTGCTCCWGCTTCTAYDGT Birds BarCoVer JVH_(not_published) NA NA Bird_H351_370dt Reverse Mitochondrion COI JEMU CAGGAAACAGCTATGACCCTGCTCCWGCTTCTAYDGT Birds BarCoVer JVH_(not_published) NA NA BirdF1 Forward Mitochondrion COI JEMU TTCTCCAACCACAAAGACATTGGCAC birds BarCoVer Hebert_et_al_2004 NA NA birdF1 Forward Mitochondrion COI Derycke Sofie TTCTCCAACCACAAAGACATTGGCAC birds BarCoVer BirdF1d Forward Mitochondrion COI JEMU TCAACCAACCACAAAGAYATYGGYAC Birds BarCoVer JVH_(not_published) NA NA BirdF1dt Forward Mitochondrion COI JEMU TGTAAAACGACGGCCAGTTCAACCAACCACAAAGAYATYGGYAC Birds BarCoVer JVH_(not_published) NA NA birdF1dt t missing Forward Mitochondrion COI JEMU GTAAAACGACGGCCAGTTCACCAACCACAAAGAYATYGGY birds BirdR1 Reverse Mitochondrion COI JEMU ACGTGGGAGATAATTCCAAATCCTGG birds BarCoVer Hebert_et_al_2004 NA NA birdr1 Reverse Mitochondrion COI Derycke Sofie ACGTGGGAGATAATTCCAAATCCTG birds BarCoVer birdR1d Reverse Mitochondrion COI Jemu ACGTGGGAGATGATTCCGAAKCCKGG birds BarCoVer JVH_(not_published) NA in_Tervuren British Forward Forward Nucleus Amelogenin JEMU_RBINS CCCTGGGCTCTGTAAAGAATAGTG Human aDNA_Pacha Mohandesan 2004 PCR2 : 112bp-Y/106bp-X British Forward Forward Nucleus Amelogenin JEMU_RBINS CCCTGGGCTCTGTAAAGAATAGTG Human aDNA_Pacha Mohandesan 2004 PCR2 : 112bp-Y/106bp-X Aliquot from boxADNA3 British Reverse Reverse Nucleus Amelogenin JEMU_RBINS ATCAGAGCTTAAACTGGGAAGCTG Human aDNA_Pacha Mohandesan 2004 British Reverse Reverse Nucleus Amelogenin JEMU_RBINS ATCAGAGCTTAAACTGGGAAGCTG Human aDNA_Pacha Mohandesan 2004 Aliquot from boxADNA3 C_ANTMR1DAMR1deg_R Reverse Mitochondrion COI JEMU CAWCCWGTWCCKRMNCCWKCAT NA NA NA NA NA C_ANTMR1DRonIIdeg_R Reverse Mitochondrion COI JEMU GGRGGRTARAYAGTTCATCCWGTWCC NA NA NA NA NA C113Rdeg Reverse Mitochondrion COI JEMU_RBINS GGYATWACTATRAARAARATTAT Anura Werneria Hajibabaei 2006 45°C Smith 2008 C1F0 Forward Mitochondrion COI JEMU ATTTTGATTCTTTGGTCACC Termites DAG Lo_et_al_2000 NA NA C1J1751 Forward Mitochondrion COI Frederik_Hendrickx GAGCTCCTGATATAGCTTTTCC none NA Bond_2004 C1N2776 mitochondrial C1-J-2195 Forward Mitochondrion COI JEMU_RBINS TTGATTTTTTGGTCATCCAGAAGT Phyllium Side_Phyllium Simon et al 1994 In combination with PAT (as in Buckley et al 2009 tree lobster) C1N2776 Reverse Mitochondrion COI Frederik_Hendrickx GGATAATCAGAATATCGTCGAGG none NA Bond_2004 C1J1751 mitochondrial C1R1 Reverse Mitochondrion COI JEMU ATGAATARRAAYATTATTACTC Termites DAG Lo_et_al_2000 NA NA C1R1GLO Reverse NA NA JEMU ATGAATAGGAATAGTATAACTC Termites DAG Lo_et_al_2000 NA NA C1R1SAT Reverse NA NA JEMU ATAAAAATAAATATTATGACTC Termites DAG Lo_et_al_2000 NA NA C2F2 Forward Mitochondrion COII JEMU ATACCTCGACGWTATTCAGA Termites DAG Hayashi_et_al_2003 NA NA C2J3138t Forward Mitochondrion COII Jemu_Tervuren TGTAAAACGACGGCCAGTAGAGCCTCTCCTTTAATAGAACA Diptera BC42W Wells & Sperling 2001 modified after Simon et al 1994 NA NA CAD11100R Reverse Nucleus CAD1 JEMU GTRTGYTCNGGRTGRAAYTG SYRPHIDS CAD1144F Forward Nucleus CAD1 JEMU TGTNTTYCARACNGGNATGG SYRPHIDS CAD1SYR2F Forward Nucleus CAD1 JEMU CCNCGRTTRCCRTAYTTCAT SYRPHIDS CAD1SYR8R Reverse Nucleus CAD1 JEMU GTNGGHAAYTAYGGSGTNCC SYRPHIDS CAD45SYR2341F Forward Nucleus CAD45 JEMU GGHAGYTCNATGAARAGTGTBGG SYRPHIDS CAD45SYR3682R Reverse Nucleus CAD45 JEMU GCRATYAGTTGCATRTTRAANGG SYRPHIDS CalF Forward Nucleus CalF JEMU_RBINS GARCARATTGCDGARTTYAARGARGC Oligochaetes CalR1 Reverse Nucleus CalR JEMU_RBINS TTCTTCRTARTTDACYTGDCCRTC Oligochaetes CalR2 Reverse Nucleus CalR JEMU_RBINS CATYTCRTCDACYTCYTCRTC Oligochaetes CB4F Forward Mitochondrion cytb JEMU_RBINS ACATACATGCCAACGGG Lynx DNAID "Palomares et al. 2002 Molecular Ecology 11, 2171–2182" CB6R Reverse Mitochondrion cytb JEMU_RBINS GTGGCTATAACTGTAAATAGTAATAG Lynx DNAID "Palomares et al. 2002 Molecular Ecology 11, 2171–2182" CB7R Reverse Mitochondrion cytb JEMU_RBINS TGGTAGGACATATCCTATGAAG Lynx DNAID "Palomares et al. 2002 Molecular Ecology 11, 2171–2182" CBISEt Forward Mitochondrion cytochrome b (cob) JEMU TGTAAAACGACGGCCAGTTATGTACTACCATGAGGACAAATATC Diptera Diptera CBJ10933 Forward Mitochondrion Cytb JEMU TATGTACTACCATGAGGACAAATATC sawflies ECES_PSEU Simon_et_al_1994 NA NA CBJ10933t Forward Mitochondrion cytochrome b (cob) JEMU TGTAAAACGACGGCCAGTTATGTTTTACCTTGAGGACAAATATC Diptera Diptera CBMATH Reverse Mitochondrion cob_cytb JEMU TACDGGYTTTGTTGCTACYCAGGT vertebrate Congo_expedition not_published NA NA CBMATL Forward Mitochondrion cob_cytb JEMU GTAAACTCAGAYWCAGAYAAAAT vertebrate Congo_expedition not_published NA NA CBN11367 Reverse Mitochondrion Cytb JEMU ATTACACCTCCTAATTTATTAGGAAT sawflies ECES_PSEU Simon_et_al_1994 NA NA CF1 Forward Nucleus RAG1_exon3 Vertebrates GCCGCCAGATCTTCCAGCCCT Fishes NA Clabaut_C_Salzburger_W_&_Meyer_A_(2005)_Comparative_phylogenetic_analyses_of_the_adaptive_radiation_of_lake_tanganyika_cichlid_fish:_Nuclear_sequences_are_less_homoplasious_but_also_less_informative_than_mitochondrial_DNA_J_Mol_Evol_61(5)_66681] NA NA Cho10 Reverse Nucleus EF1-alpha JEMU_RBINS ACRGCVACKGTYTGHCKCATGTC Bees HalAfrEu Danforth et al. 2003 CO1-2166F Forward Mitochondrion COI JEMU_RBINS GGAGGATTTGGTAATTTTTTAATTCC corbiculate bees Halictidae Françoso & Aria 2013 220–245 CO1-2248R Reverse Mitochondrion COI JEMU_RBINS CAAAATCTAATATTATTTATTCG corbiculate bees Halictidae Françoso & Aria 2013 302–282 CO1-2338F Forward Mitochondrion COI JEMU_RBINS CATATTTATATCATTCATCTCC corbiculate bees Halictidae Françoso & Aria 2013 395–416 CO1-2386R Reverse Mitochondrion COI JEMU_RBINS GAAAAAATTGTAAAATCAAC corbiculate bees Halictidae Françoso & Aria 2013 446–421 CO1490F Forward Mitochondrion COI EVA GGTCAACAAATCATAAAGATATTGG NA NA NA NA NA CO1aaF Forward Mitochondrion COI Malacology ATTCGGCCATTCTACCTGTG Lizard NA Robin_Rotsaert NA NA CO1aaR Reverse Mitochondrion COI Malacology GCTAAYGGTGGGTAAACAGT Lizard NA Robin_Rotsaert NA NA co1f Forward Mitochondrion COI JEMU_RBINS CCTGCAGGAGGAGGAGAYCC Anura Werneria Kessing et al. 1989 CO1R1=H5934 Reverse Mitochondrion ND2 JEMU_RBINS AGRGTGCCAATGTCTTTGTGRTT Reptiles SideReptiles Macey et al. 1997 50° CO2183R2 Reverse Mitochondrion COI EVA CCAAAAAATCAAAATARATGYTG NA NA NA NA NA CO2fwHym Forward Mitochondrion COII JEMU_RBINS caatgttcngaaatytgtgg Bees HeteroplasHym adapted by Sonet unpublished CO2fwWeiHym Forward Mitochondrion COII JEMU_RBINS atwggtcatcartgataytga Bees HeteroplasHym adapted by Sonet unpublished CO3revHym Reverse Mitochondrion COIII JEMU_RBINS ccctgaaawgttcyttcwcg Bees HeteroplasHym adapted by Sonet unpublished COH1b Reverse Mitochondrion COI JEMU_RBINS TGTATARGCRTCTGGRTARTC Decapoda GTIGoussanou2 Reuschel & Schubart 2006 Pos2515 on KY285013 -> 1277bp COH6 Reverse Mitochondrion COI JEMU_RBINS TADACTTCDGGRTGDCCAAARAAYCA Decapoda GTIGoussanou2 Schubart & Huber 2006 Pos1897 on KY285013 -> 659bp COI_ Forward Mitochondrion COI EVA GGTCAACAAATCATAAAGATATTGG NA Oonopidae NA NA NA COI_Squatina1F Forward Mitochondrion COI JEMU_RBINS GCCCACGCTTTGGTGATAATTT Squatina squatina Squatina COI_Squatina1R Reverse Mitochondrion COI JEMU_RBINS AAGGAAGGAGGCAAAAGTCAGA Squatina squatina Squatina COI_Squatina2F Forward Mitochondrion COI JEMU_RBINS TTGCAGGAAATTTAGCTCACGC Squatina squatina Squatina COI_Squatina2R Reverse Mitochondrion COI JEMU_RBINS TTGATACTGGGAAATGGCTGGG Squatina squatina Squatina COI_stena_F1 Forward Mitochondrion COI JEMU_RBINS TTAAGWATATTAATTCGTTCWGARYTAGG Isopoda/Stenasellidae SideIsopodaPM Morvan et al 2013 COI_StenaR508 Reverse Mitochondrion COI JEMU_RBINS AAAGCTGTTAAGAATGCAGACCAGAC Isopoda/Stenasellidae SideIsopodaPM Morvan et al 2014 COI_StenaR719 Reverse Mitochondrion COI JEMU_RBINS TTTATTAGACTCTTGACTAACGATATGAG Isopoda/Stenasellidae SideIsopodaPM Morvan et al 2015 COI2183R2 Reverse Mitochondrion COI EVA CCAAAAAATCAAAATARATGYTG NA Oonopidae NA NA NA COI-3F Forward Mitochondrion COI JEMU_RBINS GAACCGGATGAACCGTCTAC Walrus Odobenus rosmarus DNADD Lindqvist et al. 2009 Zool Scr. doi:10.1111/j.1463-6409.2008.00364.x. COI-3R Reverse Mitochondrion COI JEMU_RBINS CCGCTGTAATTAATACGGACCA Walrus Odobenus rosmarus DNADD Lindqvist et al. 2009 Zool Scr. doi:10.1111/j.1463-6409.2008.00364.x. COI780F Forward Mitochondrion COI JEMU CARCAYYTATTYTGATTTTTTGG SYRPHIDS COI780R Reverse Mitochondrion COI JEMU CCAAAAAATCARAATARRTGYTG SYRPHIDS COIa Reverse Mitochondrion COI JEMU_RBINS AGTATAAGCGTCTGGGTAGTC Anura Werneria Palumbi et al. 2002 COIcalvin NA Mitochondrion COI Jemu GGRAARAAWGTTAARTTWACTCC Termites DAG Whiting_lab_BYUa_in_Legendre_et_al_2008 NA NA COIceF Forward Mitochondrion COI JEMU_RBINS ACTGCCCACGCCCTAGTAATGATATTTTTTATGGTNATGCC Echinodermata MolChaRE "Hoareau, T.B. & Boissin, E. Molecular Ecology Resources 2010, 10 (6), 960–7." 202–242 COIceF (aliquot 100 µM) Forward Mitochondrion COI JEMU_RBINS ACTGCCCACGCCCTAGTAATGATATTTTTTATGGTNATGCC Echinodermata MolChaRE "Hoareau, T.B. & Boissin, E. Molecular Ecology Resources 2010, 10 (6), 960–7." 202–242 COIceR Reverse Mitochondrion COI JEMU_RBINS TCGTGTGTCTACGTCCATTCCTACTGTRAACATRTG Echinodermata MolChaRE "Hoareau, T.B. & Boissin, E. Molecular Ecology Resources 2010, 10 (6), 960–7." 898–933 COIceR (aliquot 100 µM) Reverse Mitochondrion COI JEMU_RBINS TCGTGTGTCTACGTCCATTCCTACTGTRAACATRTG Echinodermata MolChaRE "Hoareau, T.B. & Boissin, E. Molecular Ecology Resources 2010, 10 (6), 960–7." 898–933 COI-E- Reverse Mitochondrion COI JEMU_RBINS tatacttctgggtgtccgaagaatca oligochaetes Cryoli "Bely & Wray, 2004" COIeF Forward Mitochondrion COI JEMU_RBINS ATAATGATAGGAGGRTTTGG Echinodermata MolChaRE Arndt et al. 1996 COIeF (aliquot 100 µM) Forward Mitochondrion COI JEMU_RBINS ATAATGATAGGAGGRTTTGG Echinodermata MolChaRE Arndt et al. 1996 COIeR Reverse Mitochondrion COI JEMU_RBINS GCTCGTGTRTCTACRTCCAT Echinodermata MolChaRE Arndt et al. 1996 COI-E-R Reverse Mitochondrion COI JEMU_RBINS (aliquot) TATACTTCTGGGTGTCCGAAGAATCA Annelida Cryoli "Bely, A. E., & Wray, G. A. (2004). Molecular phylogeny of naidid worms (Annelida: Clitellata) based on cytochrome oxidase I. Mol Phylogenet Evol, 30, 50-63." 658bp COI-E-R Reverse Mitochondrion COI JEMU_RBINS TATACTTCTGGGTGTCCGAAGAATCA Annelida Cryoli "Bely, A. E., & Wray, G. A. (2004). Molecular phylogeny of naidid worms (Annelida: Clitellata) based on cytochrome oxidase I. Mol Phylogenet Evol, 30, 50-63." 658bp COIF Forward Mitochondrion COI Jemu GAACAGAACTTGGACAACA Termites DAG BT_Aldrich1_and_S_Kambhampati_2007 NA NA COIF Forward Mitochondrion COI EVA GGGGGGTTTGGAAATTGATTAGTTCC NA NA Folmer_et_al_1994 NA NA COIF(b11834) Forward Mitochondrion COI JEMU CAACAAATCATAAAGATATTGG insects COIF(tl1862) Forward Mitochondrion COI JEMU TACTTCGTATTCGGAGCTTGA insects COIIAtLeumod Forward Mitochondrion COII Jemu CAGATAAGTGCATTGGATTT Termites DAG Miura_et_al_(1998) NA NA COIIBtLys Reverse Mitochondrion COII Jemu GTTTAAGAGACCAGTACTTG Termites DAG Beckenbach_et_al_(1993) NA NA COIIF Forward Mitochondrion COII CAGATAAGTGCATTGGATTT Diptera Diptera COII-Leu-F Forward Mitochondrion COII Jemu TCTATTTTGGCAGATAAGTG COIIR Reverse Mitochondrion COII GTTTAAGAGACCAGTACTTG Diptera Diptera COIPatR Reverse Mitochondrion COI JEMU TCCAATGCACTAATCTGCCATATTA SYRPHIDS seems empty/dry COI-Pstrou-R1 Reverse Mitochondrion COI JEMU_RBINS AGGTGTTGGTACAGAATTGGGTCCCCTC Isopoda SideIsopodaPM Calvignac et al 2011 to use in comb with LCO1490 COI-Psyna-R1 Reverse Mitochondrion COI JEMU_RBINS GTATTTAAGTTACGGTCAGTTAATAGTATGGTGATAG Isopoda SideIsopodaPM Calvignac et al 2011 to use in comb with LCO1490 COIR Reverse Mitochondrion COI Jemu CTACTGTGAATATRTGRTGTGC Termites DAG BT_Aldrich1_and_S_Kambhampati_2007 NA NA COIR Reverse Mitochondrion COI EVA CCCGGTAAAATTAAAATATAAACTTC NA NA C1N2191 NA NA COIR(th2397) Reverse Mitochondrion COI JEMU GTTAGTAGTATTGTGATTGCTCC insects COIR(th2472) Reverse Mitochondrion COI JEMU AATA?GTGTTGGTATAGGAT insects COL6a Forward Mitochondrion COI JEMU_RBINS TCWACAAATCATAAAGAYATTGG Decapoda GTIGoussanou2 Schubart 2009 Pos1238 on KY285013 CR1 Reverse Nucleus RAG1_intron2 Vertebrates AGGGCTGGAATATCTGGCGG Fishes NA Clabaut_C_Salzburger_W_&_Meyer_A_(2005)_Comparative_phylogenetic_analyses_of_the_adaptive_radiation_of_lake_tanganyika_cichlid_fish:_Nuclear_sequences_are_less_homoplasious_but_also_less_informative_than_mitochondrial_DNA_J_Mol_Evol_61(5)_66681] NA NA CR-1F Forward Mitochondrion CR JEMU_RBINS GCCTATTGCCGGTATAATCG Walrus Odobenus rosmarus DNADD Lindqvist et al. 2009 Zool Scr. doi:10.1111/j.1463-6409.2008.00364.x. CR2bR Reverse Mitochondrion Control Region JEMU_RBINS CCGGAGCGAGAAGAGGTACA Lynx DNAID "Palomares et al. 2002 Molecular Ecology 11, 2171–2182" CR-2F Forward Mitochondrion CR JEMU_RBINS CTGACGCCCTACCATTCATA Walrus Odobenus rosmarus DNADD Lindqvist et al. 2009 Zool Scr. doi:10.1111/j.1463-6409.2008.00364.x. CR-3F Forward Mitochondrion CR JEMU_RBINS AATTCACTTGGTCCGTCAAGC Walrus Odobenus rosmarus DNADD Lindqvist et al. 2009 Zool Scr. doi:10.1111/j.1463-6409.2008.00364.x. CR-4F Forward Mitochondrion CR JEMU_RBINS TGGGACATCTCGATGGACTT Walrus Odobenus rosmarus DNADD Lindqvist et al. 2009 Zool Scr. doi:10.1111/j.1463-6409.2008.00364.x. CR5 Reverse Nucleus RAG1_exon3 Vertebrates TGCGGGCGTAGTTTCCATTCA Fishes NA Clabaut_C_Salzburger_W_&_Meyer_A_(2005)_Comparative_phylogenetic_analyses_of_the_adaptive_radiation_of_lake_tanganyika_cichlid_fish:_Nuclear_sequences_are_less_homoplasious_but_also_less_informative_than_mitochondrial_DNA_J_Mol_Evol_61(5)_66681] NA NA CRaF Forward Mitochondrion Control_region Malacology CATCAATCACTACCCTCCATAATC Lizard NA Robin_Rotsaert NA NA CRaR_ Reverse Mitochondrion Control_region Malacology GTAGGAGCACTTGAGATGAGGTC Lizard NA Robin_Rotsaert NA NA CRbF Forward Mitochondrion Control_region Malacology TTACCCTCTTACCCTTGCTC Lizard NA Robin_Rotsaert NA NA CRbR Reverse Mitochondrion Control_region Malacology TTTAGTTTCGTGTGATGAGCA Lizard NA Robin_Rotsaert NA NA Cyb1  Forward Mitochondrion BopCo CCATCCAACATCTCAGCATGATGAAA Kessingetal.1989 Cyb2 Reverse Mitochondrion BopCo CCCTCAGAATGATATTTGTCCTCA Kessingetal.1989 CycAF Forward Nucleus CycAF JEMU_RBINS GSTGAYGTDGTTCCDAARACDGC Oligochaetes CycAR Reverse Nucleus CycAR JEMU_RBINS ACCRAAYACDACRTGYTTDCCAT Oligochaetes CYT_LEP_H Reverse Mitochondrion cytochrome b (cob) JEMU_RBINS GGCTTACAAGGCCGGGGTAA Diptera Diptera CYT_LEP_L Forward Mitochondrion cytochrome b (cob) JEMU_RBINS AATGATATGAAAAACCATCGTTGTA Diptera Diptera Cytb1 Forward Mitochondrion cytb short JEMU_RBINS CCATCCAACATCTCAGCATGATGAAA Reptiles SideReptiles Kocher et al. 1989 (shortened) 1137 46º Cytb2 Reverse Mitochondrion cytb short JEMU_RBINS CCCTCAGAATGATATTTGTCCTCA Reptiles SideReptiles Kocher et al. 1989 (shortened) 1137 46º Cytb238 NA Mitochondrion Cytb JEMU CGACAACTACACTTAAACGGAGCA elephant_ID BarCoVer Bollongino_2000 NA NA Cytb389 NA Mitochondrion Cytb JEMU CCTATGAAGGCGGTGGTTATG elephant_ID BarCoVer Bollongino_2000 NA NA Cytb-F Forward Mitochondrion cytb JEMU_RBINS CCATCCAACATCTCAGCATGATGAAA Elephants DIMAMAS Lee et al 2013 Journal of forensic and legal medicine 20.3: 174-178. adapted from Kocher and Barallon 1998 cytbH14723 Reverse NA NA NA ACCAATGACATGAAAAATCATCGTT NA NA NA NA NA cytbL14723 Forward Mitochondrion Cytb Jemu ACCAATGACATGAAAAATCATCGTT NA NA NA NA NA Cytb-R Reverse Mitochondrion cytb JEMU_RBINS CCCTCAGAATGATATTTGTCCTCA Elephants DIMAMAS Lee et al 2013 Journal of forensic and legal medicine 20.3: 174-178. adapted from Kocher and Barallon 1998 D1.Ft Forward Nucleus 28S Jemu_Tervuren TGTAAAACGACGGCCAGTCCCCCTGAATTTAAGCATAT Diptera BC42W NA NA D1.Rt Reverse Nucleus 28S Jemu_Tervuren CAGGAAACAGCTATGACCTCTCTATTCAGAGTTCTTTTC Diptera Diptera D2.F Forward Nucleus 28S Jemu_Tervuren TGTAAAACGACGGCCAGTGAGGGAAAGTTGAAAAGAAC Diptera Diptera D2.Rt Reverse Nucleus 28S Jemu_Tervuren CAGGAAACAGCTATGACGTTAGACTCCTTGGTCCGTG Diptera BC42W NA NA D2-3665F Forward Nucleus 28S-D2-D3 JEMU_RBINS AGAGAGAGTTCAAGAGTACGTG Bees HalAfrEu "Cameron & Mardulyn 2001 modfied Belshaw and Quicke, 1997" "Tannealing=55-60_94 °C 1min, 65 °C 1min, and 72 °C 1min 35 cycles" D3-4048F_(28SD4for) Forward Nucleus 28S-D3-D4 JEMU_RBINS CCCGTCTTGAAACACGGACCAAGG Bees HalAfrEu Danforth et al. 2006 D3-4283R Reverse Nucleus 28S-D2-D3 JEMU_RBINS TAGTTCACCATCTTTCGGGTCCC Bees HalAfrEu "Mardulyn and WhitŽeld, 1999" "Tannealing=55-60_94 °C 1min, 65 °C 1min, and 72 °C 1min 35 cycles" D5-4749R_(28SD4rev) Reverse Nucleus 28S-D3-D4 JEMU_RBINS GTTACACACTCCTTAGCGGA Bees HalAfrEu Danforth et al. 2006 DamaCtr1F Forward Mitochondrion CR JEMU_RBINS ATTAATATAGCTCCATAAAAATCA Cervidae DNADD Masseti et al. 2008 56°C DamaCtr1R Reverse Mitochondrion CR JEMU_RBINS AGGAAAGAACCAGATGTCTGATAA Cervidae DNADD Masseti et al. 2008 56°C Darw1F Forward Mitochondrion COI Karin Breugelmans ATGTTGTAGTGACTGCTCAT Darwinitium Ganesella karin et al in press 114133 compared to fragment obtained with LCO "usage description in doc file ""primers Darwinitium.docx""" Darw2F Forward Mitochondrion COI Karin Breugelmans ATAATTGGGGGRTTTGGGAATTG Darwinitium – Ganesella karin et al in press 170192 on fragment obtained with LCO Darw3F Forward Mitochondrion COI Karin Breugelmans TCTCCTCYATTCTTGGGGCAAT Darwinitium – Ganesella karin et al in press 414435 on fragment obtained with LCO Darw4F Forward Mitochondrion COI Karin Breugelmans GGAATAACTATAGAACGAGTAAGA Darwinitium – Ganesella karin et al in press 473496 on fragment obtained with LCO Darw5R Reverse Mitochondrion COI Karin Breugelmans GGNGGATAAACAGTYCACCCAGT Darwinitium – Ganesella karin et al in press 342320 on fragment obtained with LCO dgHCO2198 Reverse Mitochondrion COI JEMU_RBINS TAAACTTCAGGGTGACCAAARAAYCA Anura Werneria "Meyer et al., 2005" dgLCO1490 Forward Mitochondrion COI JEMU_RBINS GGTCAACAAATCATAAAGAYATYGG Anura Werneria "Meyer et al., 2005" DL1F Forward Mitochondrion Dloop JEMU_RBINS TTGCCCAGTATGTCTTCACC Lynx DNAID "Palomares et al. 2002 Molecular Ecology 11, 2171–2182" 3.F4 DL-1R Reverse Mitochondrion CR JEMU_RBINS TGTGATGGTACAGTAGGGGTGA Walrus Odobenus rosmarus DNADD Lindqvist et al. 2009 Zool Scr. doi:10.1111/j.1463-6409.2008.00364.x. DL-2R Reverse Mitochondrion CR JEMU_RBINS AAGGGTTGCTGGTTTCTCG Walrus Odobenus rosmarus DNADD Lindqvist et al. 2009 Zool Scr. doi:10.1111/j.1463-6409.2008.00364.x. DL-3R Reverse Mitochondrion CR JEMU_RBINS TTATGTGTGATCATGGGCTGA Walrus Odobenus rosmarus DNADD Lindqvist et al. 2009 Zool Scr. doi:10.1111/j.1463-6409.2008.00364.x. DL-4R Reverse Mitochondrion CR JEMU_RBINS CGTGTATGTCCTGTGACCATT Walrus Odobenus rosmarus DNADD Lindqvist et al. 2009 Zool Scr. doi:10.1111/j.1463-6409.2008.00364.x. DL5R Reverse Mitochondrion Dloop JEMU_RBINS TACATGCTTAATATTCATGGGATT Lynx DNAID "Palomares et al. 2002 Molecular Ecology 11, 2171–2182" 3.G4 DL7F Forward Mitochondrion Dloop JEMU_RBINS CTTAATCGTGCATTATACCTTGT Lynx DNAID "Palomares et al. 2002 Molecular Ecology 11, 2171–2182" dNKf1 Forward Nucleus Dnk deoxyribonucleoside kinase JEMU GARGGYAAYATMGGHAGCGGKAARAC corbiculate Apinae Halictus Kawakita et al. 2008 Tm=54.4 %GC=38.5 dNKr1 Reverse Nucleus Dnk deoxyribonucleoside kinase JEMU AGCCAKTCMTCRTGMATMTTRTGMAGYT corbiculate Apinae Halictus Kawakita et al. 2008 Tm=53.4 %GC=28.6 EA1 Forward Nucleus Enol JEMU_RBINS CAGCAATCAATGTCATCAAYGGWGG Decapoda GTIGoussanou Tsang et al. (2011) EA2 Forward Nucleus Enol JEMU_RBINS AGTTGGCTATGCAGGARTTYATGAT Decapoda GTIGoussanou Tsang et al. (2011) EC-2F Forward Nucleus 18S JEMU_RBINS AYCTGGTTGATYYTGCCAG Holothuroidea SideEchino Lacey et al. 2005 EchinoF1 Forward Mitochondrion COI JEMU_RBINS TTTCAACTAATCATAAGGACATTGG Echinodermata MolChaRE "Ward et al. 2008 Molecular Ecology Resources 8, 1202–1211 after Folmer et al. 1994" EchinoF1 (aliquot 100 µM) Forward Mitochondrion COI JEMU_RBINS TTTCAACTAATCATAAGGACATTGG Echinodermata MolChaRE "Ward et al. 2008 Molecular Ecology Resources 8, 1202–1211 after Folmer et al. 1994" EchinoR1 Reverse Mitochondrion COI JEMU_RBINS CTTCAGGGTGTCCAAAAAATCA Echinodermata MolChaRE "Ward et al. 2008 Molecular Ecology Resources 8, 1202–1211 after Folmer et al. 1994" EchinoR1 (aliquot 100 µM) Reverse Mitochondrion COI JEMU_RBINS CTTCAGGGTGTCCAAAAAATCA Echinodermata MolChaRE "Ward et al. 2008 Molecular Ecology Resources 8, 1202–1211 after Folmer et al. 1994" EF1 Forward Nucleus F2 copy of EFl-alpha JEMU_RBINS AAGATCGGTGGTATCGGTAC Bees HalAfrEu "Arias & Sheppard, 2005" EF2 Reverse Nucleus F2 copy of EFl-alpha JEMU_RBINS TGGTGAGCGCTGCTGGAG Bees HalAfrEu "Arias & Sheppard, 2005" EF4 Forward Nucleus EF JEMU GARGGTGGTATYACMATTGA Diptera BC42W Collins_Wiegmann_2002_InsectSystEvol NA NA EF5 Reverse Nucleus EF JEMU CTCATATCACGTACAGCRAARGG Diptera BC42W Collins_Wiegmann_2002_InsectSystEvol NA NA EFF05t Forward Nucleus Elongation factor JEMU TGTAAAACGACGGCCAGTCCTGGACATCGTGATTTCAT Diptera:Sarcophagidae NICC "Ready et al., 2009, Medical and Veterinary Entomology) (401bp intronless)" EFF06t Forward Nucleus Elongation factor JEMU CAGGAAACAGCTATGACTTACCTTCAGCGTTACCTTC Diptera:Sarcophagidae NICC "Ready et al., 2009, Medical and Veterinary Entomology) (401bp intronless)" Efint_f1 Forward Nucleus Elongation factor JEMU_RBINS AGAGATTTYATTAARAACATGAT Diptera BC42W Efint_f2 Forward Nucleus Elongation factor JEMU_RBINS ATTGTWGCNGCYGGTACTGGTGAA Diptera BC42W Efint_r Reverse Nucleus Elongation factor JEMU_RBINS ACAATAGCRGCATCACCWGAT Diptera BC42W Ele-COL6A3-F1 Forward Mitochondrion cytb-CR JEMU_RBINS GACTTTGTCCGCAACAACCT Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-COL6A3-R1 Reverse Mitochondrion cytb-CR JEMU_RBINS TTTCTCAAAGCTTCTGCCTCA Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-COL6A3-R2 Reverse Mitochondrion cytb-CR JEMU_RBINS CAGTTGTCTGTGTTAGGTGCTTG Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-cytB-F1 Forward Mitochondrion Cytb JEMU_RBINS TGTGGGGGTTTCTATACTGGA Loxodonta & Elephas DNADD Cappellini et al. 2013 70-95 bp Annealing at 52 °C Ele-cytB-R1 Reverse Mitochondrion Cytb JEMU_RBINS GGGCGATTTTAGGTGAGATG Loxodonta & Elephas DNADD Cappellini et al. 2013 70-95 bp Annealing at 52 °C Ele-GSTP1-F1 Forward Mitochondrion cytb-CR JEMU_RBINS CACCGAGGCCCAAGTCAG Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-GSTP1-R1 Reverse Mitochondrion cytb-CR JEMU_RBINS GCCAGCACTCACGTAGTTGG Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-HBB/D-F1 Forward Mitochondrion cytb-CR JEMU_RBINS CCGGAGGTTCTTTGAACACTT Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-HBB/D-F2 Forward Mitochondrion cytb-CR JEMU_RBINS GACCCGGAGGTTCTTTGAA Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-HBB/D-R1 Reverse Mitochondrion cytb-CR JEMU_RBINS TCACCAAAGGAGGTCAACACT Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-HBB/D-R2 Reverse Mitochondrion cytb-CR JEMU_RBINS CCAAAGGAGGTCAACACTTTC Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-IARS-F1 Forward Mitochondrion cytb-CR JEMU_RBINS AAGAGCCGTATTCATGATTTTC Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-IARS-R1 Reverse Mitochondrion cytb-CR JEMU_RBINS CACACCCTCCTCCTTAAAGC Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-ND5-F1 Forward Mitochondrion ND5 JEMU_RBINS AGGAGTTGGCATTATGTCCTT Loxodonta & Elephas DNADD Cappellini et al. 2013 70-95 bp Annealing at 52 °C Ele-ND5-R1 Reverse Mitochondrion ND5 JEMU_RBINS TTGCTTGTAGAGCTGCTGTG Loxodonta & Elephas DNADD Cappellini et al. 2013 70-95 bp Annealing at 52 °C Ele-ND5-R3 Reverse Mitochondrion ND5 JEMU_RBINS YTYAGTGGYGAGCATGAAT Loxodonta & Elephas DNADD Cappellini et al. 2013 70-95 bp Annealing at 50 °C Ele-SPR-F1 Forward Mitochondrion cytb-CR JEMU_RBINS AAGGGCTGGGCACTGTACT Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C Ele-SPR-R1 Reverse Mitochondrion cytb-CR JEMU_RBINS TTCCCTGCAAAGGACAGACT Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C EmphF2for Forward Nucleus F2 copy of EFl-alpha JEMU_RBINS GCCTGGGTATTGGATAAGCTGAA Bees HalAfrEu Danforth and Ji 2001 Tannealing50 Elongation factor alpha (f2 copy) EmphF2rev Reverse Nucleus F2 copy of EFl-alpha JEMU_RBINS TGGATTGTTYTTRGAGTCACCAG Bees HalAfrEu Danforth and Ji 2001 Tannealing50 Elongation factor alpha (f2 copy) empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty empty ES1 Reverse Nucleus Enol JEMU_RBINS ACTTGGTCAAATGGRTCYTCAAT Decapoda GTIGoussanou Tsang et al. (2011) ES2 Reverse Nucleus Enol JEMU_RBINS ACCTGGTCGAATGGRTCYTC Decapoda GTIGoussanou Tsang et al. (2011) Exon-4-F1 Forward Nucleus Endothelin receptor type B (Ednrb) JEMU_RBINS GAAAGCTGCGGAGCGGCCACC Equus ZebravsDonkey Steiner 2011 Exon-4-R1 Reverse Nucleus Endothelin receptor type B (Ednrb) JEMU_RBINS CTTGTAGACATTGATGGGGATG Equus ZebravsDonkey Steiner 2011 F_C1J2183 Forward Mitochondrion COI JEMU CAACATTTATTTTGATTTTTTGG Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2001 NA NA F_C1J2183t Forward Mitochondrion COI JEMU TGTAAAACGACGGCCAGTCAACATTTATTTTGATTTTTTGG Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2001 F_C1J2495 Forward Mitochondrion COI JEMU CAGCTACTTTATGAGCTTTAGG Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2003 NA NA F_C1J2495t Forward Mitochondrion COI JEMU TGTAAAACGACGGCCAGTCAGCTACTTTATGAGCTTTAGG Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2003 F_TYJ1460 Forward Mitochondrion COI JEMU TACAATTTATCGCCTAAACTTCAGCC Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol1999 NA same_as_mtd4_from_primers_Singapore_via_Grootaert F_TYJ1460t Forward Mitochondrion COI JEMU TGTAAAACGACGGCCAGTTACAATTTATCGCCTAAACTTCAGCC Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol1999 F1.2 Forward Mitochondrion COI JEMU_RBINS CNACNAAYCAYAARRAYMTYGG Mantis ManTiS Svenson and Whiting 2009 F2.1 Forward Mitochondrion COI JEMU_RBINS GCHCAYCAYATRTTYACHGTWGGW Mantis ManTiS Svenson and Whiting 2009 F2.1 Forward Mitochondrion COI JEMU_RBINS GCHCAYCAYATRTTYACHGTWGGW Mantis ManTiS Svenson and Whiting 2009 F2.1 Forward Mitochondrion COI JEMU_RBINS GCHCAYCAYATRTTYACHGTWGGW Mantis ManTiS Svenson and Whiting 2009 F2-Rev1 Reverse Nucleus EF1-alpha JEMU_RBINS AATCAGCAGCACCTTTAGGTGG Bees HalAfrEu Danforth et al. 2003 F2rev-ERROR-take F2-Rev1 Reverse Nucleus F2 copy of EFl-alpha JEMU_RBINS AATCAGCACCTTTAGGTGG Bees HalAfrEu Danforth et al. (1999) Tannealing50 Elongation factor alpha (f2 copy) F700 Forward Nucleus rag1 short JEMU_RBINS GGAGACATGGACACAATCCATCCTAC Reptiles SideReptiles Bauer et al. 2007 1023 53º Fallow1R Reverse Mitochondrion CR JEMU_RBINS AAGCATGGGGTATATAAGTAATGT Cervidae DNADD Sykes2011 51°C Fallow2F Forward Mitochondrion CR JEMU_RBINS AACATGTGATACAACCCTACGC Cervidae DNADD Sykes2011 55°C Fallow2R Reverse Mitochondrion CR JEMU_RBINS GATCCTTGTCTAGCGGGT Cervidae DNADD Sykes2011 55°C Farrell_cobF Forward Mitochondrion cytb JEMU_RBINS AAACTGCAGCCCCTCAGAATGATATTTGTCCTCA Carnivora DNAID "Farrell et al (2000) Molecular Ecology 9, 1583–1590" Farrell_cobR Reverse Mitochondrion cytb JEMU_RBINS TATTCT TTATCTGCCTATACATRCACG Carnivora DNAID "Farrell et al (2000) Molecular Ecology 9, 1583–1590" fb2 Forward Nucleus NaK JEMU_RBINS ATGACAGTCGCYCAYATGTGGTT Decapoda GTIGoussanou Tsang et al. (2008) FF2d_1_ Forward Mitochondrion COI JEMU TTCTCCACCAACCACAARGAYATYGG fishes BarCoVer Ivanova_et_al_2007 6446 NA FishF2_t1 Forward Mitochondrion COI JEMU TGTAAAACGACGGCCAGTCGACTAATCATAAAGATATCGGCAC fish_mammal_cocktail BarCoVer Ward_et_al_2005 6448 COI3_C_FishF1t1 FishR2 Reverse Mitochondrion COI JEMU ACTTCAGGGTGACCGAAGAATCAGAA Fish BarCoVer Ivanova_et_al_2007 NA NA FishR2_t1 Reverse Mitochondrion COI JEMU CAGGAAACAGCTATGACACTTCAGGGTGACCGAAGAATCAGAA fish_mammal_cocktail BarCoVer Ward_et_al_2005 7152 COI3_C_FishF1t1 For1-deg Forward Nucleus EF1-alpha JEMU_RBINS GYATCGACAARCGTACSATYG Bees HalAfrEu Danforth et al. 2003 For3 Forward Nucleus EF1-alpha JEMU_RBINS GGNGACAAYGTTGGYTTCAACG Bees HalAfrEu Danforth et al. 2003 FR1d_1_ Reverse Mitochondrion COI JEMU CACCTCAGGGTGTCCGAARAAYCARAA fishes BarCoVer Ivanova_et_al_2007 7152 NA FR1d_t1 Reverse Mitochondrion COI JEMU CAGGAAACAGCTATGACACCTCAGGGTGTCCGAARAAYCARAA fish_mammal_cocktail BarCoVer Ivanova_et_al_2007 7152 COI3_C_FishF1t1 FUF Forward Nucleus cmos JEMU_RBINS TTTGGTTCKGTCTACAAGGCTAC Reptiles SideReptiles Gamble et al. 2008 668 53º FUR Reverse Nucleus cmos JEMU_RBINS AGGGAACATCCAAAGTCTCCAAT Reptiles SideReptiles Gamble et al. 2008 668 53º FWD_16S Palumbi 1996 Forward Mitochondrion 16S JEMU_RBINS CGCCTGTTACCAAAAACAT Anura Werneria Palumbi 1996 GA Forward Nucleus GAPDH JEMU_RBINS ATGGTGTATATGTTCAAGTAYGAYTC Decapoda GTIGoussanou Tsang et al. (2011) gib47710 Reverse Nucleus dsx-like JEMU_RBINS TGAATGCAGACGGCTTCGGATTAG Oedothorax gibbosus Ogibbosus designed by Amariscal "pos on scaffold 156723, ORF1 on reverse" 359bp 71.9°C /Amplifx gib48022 Forward Nucleus dsx-like JEMU_RBINS AAGTATGGTCAAGGGCCACAAGAG Oedothorax gibbosus Ogibbosus designed by Amariscal "pos on scaffold 156723, ORF1 on reverse" 359bp 68.3°C /Amplifx gib48536 Reverse Nucleus dsx-like JEMU_RBINS TGGGTTCGCTTTGGCATTTG Oedothorax gibbosus Ogibbosus designed by Amariscal "pos on scaffold 156723, ORF1 on reverse" 423bp 70.3°C /prime3 gib48920 Forward Nucleus dsx-like JEMU_RBINS GGAGAACGGACCCCTTCTTG Oedothorax gibbosus Ogibbosus designed by Amariscal "pos on scaffold 156723, ORF1 on reverse" 423pb 67.3°C /prime3 gib53269 Reverse Nucleus dsx-like JEMU_RBINS TCGACCTCATCTGTTTGGATCCCT Oedothorax gibbosus Ogibbosus designed by Amariscal "pos on scaffold 156723, ORF2 on reverse" 316bp 70.9°C /Amplifx gib53424 Reverse Nucleus dsx-like JEMU_RBINS GGGCACTTCTTGTACGGACA Oedothorax gibbosus Ogibbosus designed by Amariscal "pos on scaffold 156723, ORF2 on reverse" 315bp 65.4°C /prime3 gib53531 Forward Nucleus dsx-like JEMU_RBINS TACCAGAAGTCATCCCAGGCGATA Oedothorax gibbosus Ogibbosus designed by Amariscal "pos on scaffold 156723, ORF2 on reverse" 316bp 69.6°C /Amplifx gib53700 Forward Nucleus dsx-like JEMU_RBINS GACAGCTGAGAACCCCCAAG Oedothorax gibbosus Ogibbosus designed by Amariscal "pos on scaffold 156723, ORF2 on reverse" 315bp 65.4°C /prime3 GlobXF Forward Nucleus GlobXF JEMU_RBINS AGTTGACTGAAGAACGCAGAGAAGCGGT Oligochaetes GlobXR Reverse Nucleus GlobXR JEMU_RBINS CGCGAAGATCCTTGAAGTACTCTTGGTA Oligochaetes Glu2_ NA NA Glu Synodontis AACCACCGTTGTTATTCAACTA Synodontis NA NA NA NA Glyt_F559 Forward NA Glyt Vertebrates GGACTGTCMAAGATGACCACMT Fishes NA Li_et_al_2007 NA NA Glyt_F577 Forward NA Glyt Vertebrates ACATGGTACCAGTATGGCTTTGT Fishes NA Li_et_al_2007 NA NA Glyt_R1464 Reverse NA Glyt Vertebrates GTAAGGCATATASGTGTTCTCTCC Fishes NA Li_et_al_2007 NA NA Glyt_R1562 Reverse NA Glyt Vertebrates CCCAAGAGGTTCTTGTTRAAGAT Fishes NA Li_et_al_2007 NA NA Gor_H333_354 Reverse Mitochondrion COI Jemu TACTATAGCGGATGCGAGCAGA Gorillas BarPan JVH_(not_published) NA in_Tervuren H_CYTB Reverse Mitochondrion Cytochrome_b Vertebrates CAGGTGAGGATGGCGACG Fishes NA Bruno_et_al_in_prep NA NA H1046 Reverse NA NA JEMU TAAATGGGTCTTCTACTGG NA NA NA NA NA H123 Reverse TPP16 JEMU_RBINS GAAGCCACTACCGATGTGCG Treponema pallidium aDNA_Pacha Kolman 1999 120bp H12341 Reverse Mitochondrion SNP_on_mt_genome GGTTATAGTAGTGTGCATGG Human aDNA_Tournai Sampietro 2005 H13372 Reverse Mitochondrion SNP_on_mt_genome TTGTTAAGGTTGTGGATGAT Human aDNA_Tournai Sampietro 2005 H13725 Reverse Mitochondrion SNP_on_mt_genome TAGTAATGAGAAATCCTGCG Human aDNA_Tournai Sampietro 2005 H1478 Reverse Mitochondrion 12S JEMU_RBINS TGACTGCAGAGGGTGACGGGCGGTGTGT Equus ZebravsDonkey Kocher et al. 1989 H15149 Reverse Mitochondrion cob_cytb Vertebrates GCCCCTCAGAATGATATTTGTCCTCA mammals NA adapted_from_Kocher_et_al_1989_by_HelmBychowski_and_Cracraft_(1993) NA NA H15149 Reverse Mitochondrion cob_cytb Vertebrates AAACTGCAGCCCCTCAGAATGATATTTGTCCTCA mammals NA Kocher_et_al_1989 NA not_ordered H15149 Reverse Mitochondrion cytochrome b (cob) JEMU_RBINS GCCCCTCAGAATGATATTTGTCCTCA Vertebrates H15149_Kocher Forward Mitochondrion cob - cytb JEMU_RBINS AAACTGCAGCCCCTCAGAATGATATTTGTCCTCA Mammals Squatina H15149_short Forward Mitochondrion cob - cytb JEMU_RBINS GCCCCTCAGAATGATATTTGTCCTCA Mammals Squatina H15173 Reverse Mitochondrion cytb JEMU_RBINS CCCCTCGAATGATATTTGTCCTCA Equus ZebravsDonkey "Parson et al 2000 Int J Legal Med 2000, 114:23–29" H15240 Reverse Mitochondrion cytb JEMU_RBINS TTATCTACYGAAAAGCCTCCTC Elephants DIMAMAS Ngatia 2019 H15915 Reverse Mitochondrion cob_cytb Vertebrates tctccatttctggtttacaagac mammals NA Lavrenchenko_et_Verheyen_2006 NA NA H15915_Cytb Reverse Mitochondrion cob_cytb JEMU TCTCCATTTCTGGTTTACAAGAC Vertebrates DEMOTRORO NA NA NA H16064 Reverse NA NA JEMU CTTTGGTTTACAAGAACAATGCTTTA NA NA NA NA NA H16064 Reverse Mitochondrion cytb long JEMU_RBINS CTTTGGTTTACAAGAACAATGCTTTA Reptiles SideReptiles Burbrink et al. 2000 403 46º H17F Forward Nucleus 18S JEMU_RBINS AAATTACCCACTCCCGGCA Bees HalAfrEu "Cardinal et al., 2010" "18S-H17F / 18S-H35R: 94°C for 1 min, 58°C for 1 min, 72°C for 1 min (35 cycles)." H3054 Reverse Mitochondrion SNP_on_mt_genome TCTGAACTCAGATCACGTAGGACT Human aDNA_Tournai Sampietro 2005 H35R Reverse Nucleus 18S JEMU_RBINS TGGTGAGGTTTCCCGTGTT Bees HalAfrEu "Cardinal et al., 2010" "18S-H17F / 18S-H35R: 94°C for 1 min, 58°C for 1 min, 72°C for 1 min (35 cycles)." H3AF Forward NA H3 EVA ATGGCTCGTACCAAGCAGACVGC NA Oonopidae Colgan_et_al_1998 NA NA H3AR Reverse NA H3 EVA ATATCCTTRGGCATRATRGTGAC NA Oonopidae Colgan_et_al_1998 NA NA H3F Forward Nucleus H3 JEMU_RBINS (aliquot) ATGGCTCGTACCAAGCAGACVGC Annelida Cryoli "Brown, S, Rouse, G, Hutchings, P and Colgan, D. 1999. Assessing the usefulness of histoneH3, U2 snRNA and 28S rDNA in analyses of polychaete relationships. Australian Journal of Zoology, 47: 499–516." H3F Forward Nucleus H3 JEMU_RBINS ATGGCTCGTACCAAGCAGACVGC Annelida Cryoli "Brown, S, Rouse, G, Hutchings, P and Colgan, D. 1999. Assessing the usefulness of histoneH3, U2 snRNA and 28S rDNA in analyses of polychaete relationships. Australian Journal of Zoology, 47: 499–516." H3R Reverse Nucleus H3 JEMU_RBINS (aliquot) ATATCCTTRGGCATRATRGTGAC Annelida Cryoli "Brown, S, Rouse, G, Hutchings, P and Colgan, D. 1999. Assessing the usefulness of histoneH3, U2 snRNA and 28S rDNA in analyses of polychaete relationships. Australian Journal of Zoology, 47: 499–516." H3R Reverse Nucleus H3 JEMU_RBINS ATATCCTTRGGCATRATRGTGAC Annelida Cryoli "Brown, S, Rouse, G, Hutchings, P and Colgan, D. 1999. Assessing the usefulness of histoneH3, U2 snRNA and 28S rDNA in analyses of polychaete relationships. Australian Journal of Zoology, 47: 499–516." H3R Reverse Mitochondrion CR JEMU_RBINS CCTGAAGTAGGAACCAGATG Alopex lagopus DNADD Dalen et al. 2002 ca 150 bp H6418 Reverse Mitochondrion COI JEMU_RBINS ATAKACTTCRGGGTGTCCRAAGAATCA Equus ZebravsDonkey D'Amato 2013 H689 Reverse NA NA JEMU TAAWTAWTATRATTACTCCTA Rodents DEMOTRORO Burbrink_et_al__Evolution_54(6)_2000_pp_2107 NA NA H7066 Reverse Mitochondrion SNP_on_mt_genome GAATGAAGCCTCCTATGATGG Human aDNA_Tournai Sampietro 2005 H740 Reverse NA NA JEMU GTAGTTGTCKGGRTCTCCTA Rodents DEMOTRORO Burbrink_et_al__Evolution_54(6)_2000_pp_2107 NA NA HaF2for1 Forward Nucleus F2 copy of EFl-alpha JEMU_RBINS GGGYAAAGGWTCCTTCAARTATGC Bees HalAfrEu Danforth et al. (1999) Tannealing50 Elongation factor alpha (f2 copy) HCO2183R2 Reverse Mitochondrion COI Frederik_Hendrickx CCAAAAAATCAAAATARATGYTG spider_specific NA none NA mitochondrial HCO2198 Reverse Mitochondrion COI Frederik_Hendrickx TAAACTTCAGGGTGACCAAAAAATCA none NA Folmer_et_al_1994 NA mitochondrial HCO2198 Reverse Mitochondrion COI JEMU TAAACTTCAGGGTGACCAAAAAATCA universal BarCoVer Folmer_et_al_1994 NA NA HCO2198 Reverse Mitochondrion COI JEMU_RBINS TAAACTTCAGGGTGACCAAAAAATCA universal ManTiS HCO2198 Reverse Mitochondrion COI Patrick Martin TAAACTTCAGGGTGACCAAAAAATCA universal Folmer et al. 1994 HCO2198Hym Reverse Mitochondrion COI JEMU_RBINS tctgggtncccaaaaaayca Bees HeteroplasHym adapted by Sonet unpublished HCO2198-JJ Reverse Mitochondrion COI JEMU_RBINS AWACTTCVGGRTGVCCAAARAATCA Isopoda/Stenasellidae SideIsopodaPM Astrin & Stüben 2008 see protocol email Flot HCObisHym Reverse Mitochondrion COI JEMU_RBINS caaaaaaccaaaataaatgttg Bees HeteroplasHym adapted by Sonet unpublished HCOEXTERNA NA Mitochondrion COI EVA GAAGTTTATATTTTAATTTTACCTGG NA Oonopidae NA NA NA HCOEXTERNB NA Mitochondrion COI EVA CCTATTGAWARAACATARTGAAAATG NA Oonopidae NA NA NA HCOOUTOUT Reverse Mitochondrion COI EVA GTAAATATATGRTGDGCTC NA Oonopidae Schwendinger_&_Giribet_2005 NA NA HEBSYR1F Forward Nucleus HEB JEMU GCWTGAGCTGGWATAGTAGG SYRPHIDS HEBSYR2R Reverse Nucleus HEB JEMU GGRTCTCCTCCTCCDGCSGG SYRPHIDS HexAF Forward Nucleus H3 JEMU_RBINS ATGGCTCGTACCAAGCAGACGGC Mantis ManTiS Svenson and Whiting 2004 HexAR Reverse Nucleus H3 JEMU_RBINS ATATCCTTGGGCATGATGGTGAC Mantis ManTiS Svenson and Whiting 2004 HOG3683_01_F Forward Nucleus HOG3683_01 JEMU GCYATYTTCGAYTTYGAYAG Hymenoptera Halictus "Hartig et al. 2012, PLoS ONE 7(6): e39832" Tm=60 %GC=30 HOG3683_01_R Reverse Nucleus HOG3683_01 JEMU AAVGTRAAKGATTCGTTGTA Hymenoptera Halictus "Hartig et al. 2012, PLoS ONE 7(6): e39833" Tm=54 %GC=25 HOG4652_10_F Forward Nucleus HOG4652_10 JEMU GGWTTTGGYTTTATTCGTTG Hymenoptera Halictus "Hartig et al. 2012, PLoS ONE 7(6): e39834" Tm=58 %GC=35 HOG4652_10_R Reverse Nucleus HOG4652_10 JEMU YTCTTTATTYCGYTTYACTTG Hymenoptera Halictus "Hartig et al. 2012, PLoS ONE 7(6): e39835" Tm=41.4 %GC=23.8 HOG7036_02__F Forward Nucleus HOG7036_02 JEMU TTTGTCWGYGKGTGCCTTGT Hymenoptera Halictus "Hartig et al. 2012, PLoS ONE 7(6): e39830" Tm=60 %GC=45 HOG7036_02__R Reverse Nucleus HOG7036_02 JEMU TTCATRGTWGCTTCRGTATCNGT Hymenoptera Halictus "Hartig et al. 2012, PLoS ONE 7(6): e39831" Tm=48.4 %GC=34.8 HOG703602FTAG1 Forward Nucleus HOG703602 JEMU_RBINS CTTTCCCTACACGACGCTCTTCCGATCTTTTGTCWGYGKGTGCCTTGT Halictidae Halictus HOG703602RTAG2 Reverse Nucleus HOG703602 JEMU_RBINS CTGGAGTTCAGACGTGTGCTCTTCCGATCTTTCATRGTWGCTTCRGTATCNGT Halictidae Halictus HOG7229_02_F Forward Nucleus HOG7229_02 JEMU TGCYTGATHCTSTTCTTCGT Hymenoptera Halictus "Hartig et al. 2012, PLoS ONE 7(6): e39828" Tm=58 %GC=35 HOG7229_02_R Reverse Nucleus HOG7229_02 JEMU TRTGRAAYCTRTGRAAGATGCA Hymenoptera Halictus "Hartig et al. 2012, PLoS ONE 7(6): e39829" Tm=46 %GC=27.3 holo2F Forward Mitochondrion COI JEMU_RBINS (aliquot) TGAAAAACATGAGMTTCTGA Holothurian MolChaRE Massi failed & not published Holothuria_2_MV_F holo2R1 Reverse Mitochondrion COI JEMU_RBINS (aliquot) TTCTTGCTTWCCTCTGTA Holothurian MolChaRE Massi failed & not published Holothuria_2_MV_R1 holo2R2 Reverse Mitochondrion COI JEMU_RBINS (aliquot) CATTCCTAAGTAGCCRAA Holothurian MolChaRE Massi failed & not published Holothuria_2_MV_R2 Hom_H151_173 Reverse Mitochondrion COI Jemu ACAATGACATTATAGATGTGGTC Hominids BarPan JVH_(not_published) NA in_Tervuren Hom_H349_368 Reverse Mitochondrion COI Jemu CCGGCGCCGGCTTCTACTAT Hominids BarPan JVH_(not_published) NA in_Tervuren Hom_H706_731 Reverse Mitochondrion COI Jemu TAAACTTCGGGGTGGCCAAAAAATCA Hominids BarPan JVH_(not_published) NA in_Tervuren Hom_L25_50 Forward Mitochondrion COI Jemu TCTACAAACCACAAAGATATTGGAAC Hominids BarPan JVH_(not_published) NA in_Tervuren Hor12S Reverse Mitochondrion Control Region JEMU_RBINS ggctaggaccaagcctatgtg Equus ZebravsDonkey Oakenfull 2000 HorThr Forward Mitochondrion Control Region JEMU_RBINS cattaccctggtcttgtaaacc Equus ZebravsDonkey Oakenfull 2000 HVR1_H16142 Reverse Mitochondrion Control region ATGTACTACAGGTGGTCAAG Human aDNA_Tournai Sampietro 2005 HVR1_H16158 Reverse Mitochondrion Control region TGTGGATTGGGTTTTTATGT Human aDNA_Tournai Sampietro 2005 HVR1_H16211 Reverse Mitochondrion Control region TAGTTGAGGGTTGATTGCTG Human aDNA_Tournai Sampietro 2005 HVR1_H16218 Reverse Mitochondrion Control region TGTGTGATAGTTGAGGGTTG Human aDNA_Tournai Sampietro 2005 HVR1_H16247 Reverse Mitochondrion Control region CAACTATCACACATCAACTGCAA Human aDNA_Tournai Sampietro 2005 HVR1_H16281 Reverse Mitochondrion Control region TTAAGGGTGGGTAGGTTTGT Human aDNA_Tournai Sampietro 2005 HVR1_H16356 Reverse Mitochondrion Control region GTCATCCATGGGGACGAGAA Human aDNA_Tournai Sampietro 2005 HVR1_H16385 Reverse Mitochondrion Control region GGTGGTCAAGGGACCCCTAT Human aDNA_Tournai Sampietro 2005 HVR1_H16401 Reverse Mitochondrion Control region TGATTTCACGGAGGATGGTG Human aDNA_Tournai Sampietro 2005 HVR1_L16022 Forward Mitochondrion Control region CTAATTTAAACTATTCTCT Human aDNA_Tournai Sampietro 2005 HVR1_L16055 Forward Mitochondrion Control region GAAGCAGATTTGGGTACCAC Human aDNA_Tournai Sampietro 2005 HVR1_L16081 Forward Mitochondrion Control region TTGACTCACCCATCAACAA Human aDNA_Tournai Sampietro 2005 HVR1_L16122 Forward Mitochondrion Control region CATTACTGCCAGCCACCATGAATA Human aDNA_Tournai Sampietro 2005 HVR1_L16131 Forward Mitochondrion Control region CACCATGAATATTGTACGGT Human aDNA_Tournai Sampietro 2005 HVR1_L16185 Forward Mitochondrion Control region AACCCAATCCACATCAAAACC Human aDNA_Tournai Sampietro 2005 HVR1_L16209 Forward Mitochondrion Control region CCCCATGCTTACAAGCAAGT Human aDNA_Tournai Sampietro 2005 HVR1_L16223 Forward Mitochondrion Control region AGCAAGTACAGCAATCAAC Human aDNA_Tournai Sampietro 2005 HVR1_L16261 Forward Mitochondrion Control region CAACTATCACACATCAACTGCAA Human aDNA_Tournai Sampietro 2005 HVR1_L16347 Forward Mitochondrion Control region CGTACATAGCACATTACAGT Human aDNA_Tournai Sampietro 2005 HVSI_H16142 Reverse Mitochondrion Control region ATGTACTACAGGTGGTCAAG Human aDNA_Tournai Haak 2008 HVSI_H16233 Reverse Mitochondrion Control region GCTTTGGAGTTGCAGTTGATGTGT Human aDNA_Tournai Haak 2008 HVSI_H16348 Reverse Mitochondrion Control region ATGGGGACGAGAAGGGATTTG Human aDNA_Tournai Haak 2008 HVSI_H16410 Reverse Mitochondrion Control region GCGGGATATTGATTTCACGG Human aDNA_Tournai Haak 2008 HVSI_L15996 Forward Mitochondrion Control region CTCCACCATTAGCACCCAAAGC Human aDNA_Tournai Haak 2008 146 HVSI_L16117 Forward Mitochondrion Control region TACATTACTGCCAGCCACCAT Human aDNA_Tournai Haak 2008 116 HVSI_L16209 Forward Mitochondrion Control region CCCCATGCTTACAAGCAAGT Human aDNA_Tournai Haak 2008 139 HVSI_L16287 Forward Mitochondrion Control region CACTAGGATACCAACAAACC Human aDNA_Tournai Haak 2008 123 HVSII_H00177 Reverse Mitochondrion Control region TTAGTAAGTATGTTCGCCTGTAAT Human aDNA_Tournai Haak 2008 HVSII_H00243 Reverse Mitochondrion Control region AAAGTGGCTGTGCAGACATTCAAT Human aDNA_Tournai Haak 2008 HVSII_H00327 Reverse Mitochondrion Control region TTGGCAGAGATGTGTTTAAGTGCT Human aDNA_Tournai Haak 2008 HVSII_H00397 Reverse Mitochondrion Control region AGTGCATACCGCCAAAAGATAAAA Human aDNA_Tournai Haak 2008 HVSII_L00034 Forward Mitochondrion Control region TCTATCACCCTATTAACCACTCAC Human aDNA_Tournai Haak 2008 143 HVSII_L00144 Forward Mitochondrion Control region CGCAGTATCTGTCTTTGATTCCTG Human aDNA_Tournai Haak 2008 99 HVSII_L00172 Forward Mitochondrion Control region ATCCTATTATTTATCGCACCTACG Human aDNA_Tournai Haak 2008 155 HVSII_L00274 Forward Mitochondrion Control region TGTCTGCACAGCCACTTTCCACAC Human aDNA_Tournai Haak 2008 123 IcCytbF1_ Forward Mitochondrion cytb Synodontis TTTYTACAYGAAACVGGCTCCAA Synodontis NA NA NA NA IcCytbR1_ Reverse Mitochondrion cytb Synodontis TTGGAGCCBGTTTCRTGTARAAA Synodontis NA NA NA NA ICytbF1_ Forward Mitochondrion Cytb Synodontis TTCCTTYCACCCCTATTTCT Synodontis NA NA NA NA ICytbR1_ Reverse Mitochondrion Cytb Synodontis CTGGGGTGAAGTTTTCTGGG Synodontis NA NA NA NA IS-A-F Forward IS6110 JEMU_RBINS CCTGCGAGCGTAGGCGTCGG Tuberculosis aDNA_Pacha "Arriaza 1995, Salo 1994, Konomi 2002" 123bp IS-B-R Reverse IS6111 JEMU_RBINS CTCGTCCAGCGCCGCTTCGG Tuberculosis aDNA_Pacha "Arriaza 1995, Salo 1994, Konomi 2002" 123bp IS-C-F Forward IS6112 JEMU_RBINS GCGTCGGTGACAAAGGCCAC Tuberculosis aDNA_Pacha "Arriaza 1995, Salo 1994, Konomi 2002" 97bp nested IS-D-R Reverse IS6113 JEMU_RBINS GCTTCGGACCACCAGCACCT Tuberculosis aDNA_Pacha "Arriaza 1995, Salo 1994, Konomi 2002" 97bp nested IS-F Forward IS6114 JEMU_RBINS GGGTAGCAGACCTCACCTATGTG Tuberculosis aDNA_Pacha "Klaus, 2010" 63bp F=R IS-R Reverse IS6115 JEMU_RBINS CGGTGACAAAGGCCACGTA Tuberculosis aDNA_Pacha "Klaus, 2010" R=Forward ITS_18D NA Nucleus ITS Vertebrates TACACACCGCCCGTCGCTACTACCG Fishes NA Poux_et_al_(in_prep)_ NA NA ITS_28C NA Nucleus ITS Vertebrates CTTAAATTCAGCGGGTTGTCTCGTCTG Fishes NA Poux_et_al_(in_prep)_ NA NA ITS_58C NA Nucleus ITS Vertebrates GTGCGTTCGAAGTGTCGATGATCAA Fishes NA Poux_et_al_(in_prep)_ NA NA ITS2 Forward Nucleus ITS JEMU GCTGCGTTCTTCATCGATGC Apidae (Meliponini) Halictus Pereira 2009 Tm=62 %GC=55 ITS2a Forward Nucleus ITS2 JEMU_RBINS TGTGAACTGCAGGACACAT Syrphids SPEBAS ITS2b Reverse Nucleus ITS2 JEMU_RBINS TATGCTTAAATTCAGGGGGT Syrphids SPEBAS ITS2F.dipt Forward Nucleus ITS2 JEMU TGTAAAACGACGGCCAGTTGCTTGGACTACATATGGTTGA Diptera BC42W "Song et al., 2008 Forensic Science International 175: 1722" NA NA ITS2R.dipt Reverse Nucleus ITS2 JEMU CAGGAAACAGCTATGACGTAGTCCCATATGAGTTGAGGTT Diptera BC42W "Song et al., 2008 Forensic Science International 175: 1722" NA NA ITS2TAG1 Forward Nucleus ITS2 JEMU_RBINS CTTTCCCTACACGACGCTCTTCCGATCTGCTGCGTTCTTCATCGATGC Halictidae Halictus ITS4 Reverse Nucleus ITS Patrick Martin TCCTCCGCTTATTGATATGC ITS-4-R Reverse Nucleus ITS JEMU_RBINS (aliquot) TCCTCCGCTTATTGATATGC Annelida Cryoli "T.J. White, T.D. Bruns, S. Lee, J.W. Taylor 1990 Amplification and direct sequencing of fungal ribosomal genes for phylogenetics. in M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.), PCR Protocols, Academic Press, London (1990), pp. 315–322" ITS-4-R Reverse Nucleus ITS JEMU_RBINS TCCTCCGCTTATTGATATGC Annelida Cryoli "T.J. White, T.D. Bruns, S. Lee, J.W. Taylor 1990 Amplification and direct sequencing of fungal ribosomal genes for phylogenetics. in M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.), PCR Protocols, Academic Press, London (1990), pp. 315–322" ITS5 Reverse Nucleus ITS JEMU GCAAGTAAAAGTCGTAACAAGG Apidae (Meliponini) Halictus Pereira 2009 Tm=46 %GC=40.9 ITS5 Forward Nucleus ITS Patrick Martin GGAAGTAAAAGTCGTAACAAGG ITS-5-F Forward Nucleus ITS JEMU_RBINS (aliquot) GGAAGTAAAAGTCGTAACAAGG Annelida Cryoli "T.J. White, T.D. Bruns, S. Lee, J.W. Taylor 1990 Amplification and direct sequencing of fungal ribosomal genes for phylogenetics. in M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.), PCR Protocols, Academic Press, London (1990), pp. 315–322" ITS-5-F Forward Nucleus ITS JEMU_RBINS GGAAGTAAAAGTCGTAACAAGG Annelida Cryoli "T.J. White, T.D. Bruns, S. Lee, J.W. Taylor 1990 Amplification and direct sequencing of fungal ribosomal genes for phylogenetics. in M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.), PCR Protocols, Academic Press, London (1990), pp. 315–322" ITS5TAG2 Reverse Nucleus ITS5 JEMU_RBINS CTGGAGTTCAGACGTGTGCTCTTCCGATCTGCAAGTAAAAGTCGTAACAAGG Halictidae Halictus KALIF1 Forward Nucleus RAG1_intron2 Vertebrates AAGGGTTTATGTTCAATCAA Fishes NA Clabaut_C_Salzburger_W_&_Meyer_A_(2005)_Comparative_phylogenetic_analyses_of_the_adaptive_radiation_of_lake_tanganyika_cichlid_fish:_Nuclear_sequences_are_less_homoplasious_but_also_less_informative_than_mitochondrial_DNA_J_Mol_Evol_61(5)_66681] NA NA KIAA1239F1 Forward Nucleus KIAA1239 JEMU_RBINS CARCCTTGGGTNTTYCARTGYAA Universal nuclear proteincoding locus (NPCL) Shen et al (2011) Mol Biol Evol 28: 3237–3252. alias KIAAF1 1st PCR KIAA1239F2 Forward Nucleus KIAA1243 JEMU_RBINS GAYGARAARTACYTNGTNGT Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39260 alias KIAAF2 KIAA1239NF1 Forward Nucleus KIAA1241 JEMU_RBINS GAGCCNGAYATHTTYTTYGTNAA Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39258 alias KIAANF1 2nd nested PCR KIAA1239NF2 Forward Nucleus KIAA1245 JEMU_RBINS TTCCAYTGCTGGTAYGARGTNAC Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39262 alias KIAANF2 2nd nested PCR KIAA1239NR1 Reverse Nucleus KIAA1242 JEMU_RBINS TTCACRAANCCMCCNGAAAAYTC Universal nuclear proteincoding locus (NPCL) Shen et al (2011) Mol Biol Evol 28: 3237–3252. alias KIAANR1 2nd nested PCR KIAA1239R1 Reverse Nucleus KIAA1240 JEMU_RBINS ACMACAAAYTGGTCRTTRTGNGT Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39257 alias KIAAR1 1st PCR KIAA1239R1 Reverse Nucleus KIAA1246 JEMU_RBINS ACMACAAAYTGGTCRTTRTGNGT Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39263 alias KIAAR1 2nd nested PCR KIAA1239R2 Reverse Nucleus KIAA1244 JEMU_RBINS TCYTCNAGRTTYTTNARRAARTT Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39261 alias KIAAR2 L_ATP Forward NA ATP_synthase_6+8 Vertebrates TAGCGTTAGCCTTTTAAGCT Fishes NA Bruno_et_al_in_prep NA NA L_CYTB Forward Mitochondrion Cytochrome_b Vertebrates ACTAATGACTTGAAAAACCACC Fishes NA Bruno_et_al_in_prep NA NA L1091 Forward Mitochondrion 12S JEMU_RBINS AAAAAGCTTCAAACTGGGATTAGATACCCCACTAT Equus ZebravsDonkey Kocher et al. 1989 L12227 Forward Mitochondrion SNP_on_mt_genome GAAAGCTCACAAGAACTGC Human aDNA_Tournai Sampietro 2005 114 L13257 Forward Mitochondrion SNP_on_mt_genome AATCGTAGCCTTCTCCACTTCA Human aDNA_Tournai Sampietro 2005 115 L13669 Forward Mitochondrion SNP_on_mt_genome CACCCTTACTAACATTAACG Human aDNA_Tournai Sampietro 2005 56 L14723_Cytb Forward Mitochondrion cob_cytb JEMU ACCAATGACATGAAAAATCATCGTT Vertebrates DEMOTRORO "Ducroz JF, Volobouev V, Granjon L (2001) An Assessment of the Systematics of Arvicanthine Rodents Using Mitochondrial DNA Sequences: Evolutionary and Biogeographical Implications. J Mamm Evol 8:173–206" NA NA L14724NAT Forward Mitochondrion cob_cytb JEMU GACCTGCGGTCCGAAAAACCA NA NA NA NA NA L14816 Forward Mitochondrion cytb JEMU_RBINS CCATCCAACATCTCAGCATGATGAAA Equus ZebravsDonkey Kessingetal.1989 L14910 Forward Mitochondrion cytb long JEMU_RBINS GACCTGTGATMTGAAAACCAYCGTTGT Reptiles SideReptiles Burbrink et al. 2000 403 46º L15123 Forward Mitochondrion cytb JEMU_RBINS TACTACTRATYACYATAGCCAC Elephants DIMAMAS Ngatia 2019 L15444 Forward NA NA JEMU CCAACCTTAACACGATTCTTTGCC NA NA NA NA NA L243 Forward TPP15 JEMU_RBINS GAGCAGGATGTCTCTATGAGTTATAAAGAG Treponema pallidium aDNA_Pacha Kolman 1999 120bp L2993 Forward Mitochondrion SNP_on_mt_genome TAGGGTTTACGCCTCGATGT Human aDNA_Tournai Sampietro 2005 61 L348 Forward NA NA JEMU TTYATAGAAACATGAAACATYGGA Rodents DEMOTRORO Burbrink_et_al__Evolution_54(6)_2000_pp_2107 NA NA L5701 Forward Mitochondrion COI JEMU_RBINS CTGAYTATTYTCAACYAACCAYAAAGA Equus ZebravsDonkey D'Amato 2013 L671 Forward NA NA JEMU TTCCATTTCACCCATACTA Rodents DEMOTRORO Burbrink_et_al__Evolution_54(6)_2000_pp_2107 NA NA L6999 Forward Mitochondrion SNP_on_mt_genome CAAACTCATCACTAGACATCG Human aDNA_Tournai Sampietro 2005 67 LCO Forward Mitochondrion COI EVA GGTCAACAAATCATAAAGATATTGG NA Oonopidae Folmer_et_al_1994 NA NA LCO_KY464954 Forward Mitochondrion COI JEMU_RBINS TCTCTACAAATCACAAAGATATTGG Squatina squatina Squatina LCO1490 Forward Mitochondrion COI Frederik_Hendrickx GGTCAACAAATCATAAAGATATTGG none NA Folmer_et_al_1994 HCO2183R2/HCO2198 mitochondrial LCO1490 Forward Mitochondrion COI JEMU GGTCAACAAATCATAAAGATATTGG universal BarCoVer Folmer_et_al_1994 NA NA LCO1490 Forward Mitochondrion COI JEMU GGTCAACAAATCATAAAGATATTGG none SYRPHIDS Folmer_et_al_1994 HCO2183R2/HCO2198 mitochondrial LCO1490 Forward Mitochondrion COI JEMU_RBINS GGTCAACAAATCATAAAGATATTGG universal ManTiS LCO1490 Forward Mitochondrion COI Patrick Martin GGTCAACAAATCATAAAGATATTGG universal Folmer et al. 1994 LCO1490-JJ Forward Mitochondrion COI JEMU_RBINS CHACWAAYCATAAAGATATYGG Isopoda/Stenasellidae SideIsopodaPM Astrin & Stüben 2008 see protocol email Flot LCOech1aF1 Forward Mitochondrion COI JEMU_RBINS TTTTTTCTACTAAACACAAGGATATTGG Echinodermata MolChaRE Layton et al 2016 LCOHym Forward Mitochondrion COI JEMU_RBINS wwtcaacnaatcataaaaatattgg Bees HeteroplasHym adapted by Sonet unpublished LCOTAG1 Forward Mitochondrion COI JEMU_RBINS CTTTCCCTACACGACGCTCTTCCGATCTGGTCAACAAATCATAAAGATATTGG Halictidae Halictus LD1F – Tm 64 Forward IMP dehydrogenase gene JEMU_RBINS TGCGTGCGTGTGTGTGACATC Leishmania aDNA_Pacha Costa (2009) Tm=64 LD1R – Tm 66 Reverse IMP dehydrogenase gene JEMU_RBINS TACGTCAGTCCATCGCCCCG Leishmania aDNA_Pacha Costa (2009) Tm=66 LD3F – Tm 57 Forward kinetoplast minicircle JEMU_RBINS GGAGTAGCCTCAGGACTTTAG Leishmania aDNA_Pacha Costa (2009) Tm=57 LD3R – Tm 55 Reverse kinetoplast minicircle JEMU_RBINS TAGGTACACTCTATCAGTAGCAC Leishmania aDNA_Pacha Costa (2009) Tm=55 LEPF1 Forward Mitochondrion COI JEMU ATTCAACCAATCATAAAGATAT lepidoptera_fishes_etc BarCoVer Hebert_et_al_2004 NA NA LepF1_t1 Forward Mitochondrion COI JEMU TGTAAAACGACGGCCAGTATTCAACCAATCATAAAGATATTGG Mammal_rept_fish_amph_cocktail BarCoVer Ivanova_et_al_2007 6446 COI2_C_VF1LFt1 LepF-long Forward Mitochondrion COI JEMU_RBINS ATTCAACCAATCATAAAGATATTGG Bees Isebaf&Aculea Schmid-Egger 2015/2012 658 LepR Reverse Mitochondrion COI JEMU_RBINS TAAACTTCTGGATGTCCAAAAA Bees Isebaf&Aculea Oudere specimens 409 LEPR1 Reverse Mitochondrion COI JEMU TAAACTTCTGGATGTCCAAAAA lepidoptera_fishes_etc BarCoVer Hebert_et_al_2004 NA NA LepR1_t1 Reverse Mitochondrion COI JEMU CAGGAAACAGCTATGACTAAACTTCTGGATGTCCAAAAAATCA Mammal_rept_fish_amph_cocktail BarCoVer Hebert_et_al_2004 7155 COI2_C_VF1LFt1 LEPR2 Reverse Mitochondrion COI JEMU CTTATATTATTTATTCGTGGGAAAGC lepidoptera_fishes_etc BarCoVer Hebert_et_al_2004 NA NA LepR-long Reverse Mitochondrion COI JEMU_RBINS TAAACTTCTGGATGTCCAAAAAATCA Bees Isebaf&Aculea Referentie studie barcoding Europese bijen 658 Lep-Wg1a-For_(wg1a) Forward Nucleus Wingless JEMU_RBINS GARTGYAARTGYCAYGGYATGTCTGG Bees HalAfrEu Brower & DeSalle (1998) Lep-Wg2a-Rev Reverse Nucleus Wingless JEMU_RBINS ACTICGCARCACCARTGGAATGTRCA Bees HalAfrEu Brower & DeSalle (1998) 55 LEU1 NA NA NA NA CATTACTTTTACTTGGATTTGCACCA NA NA NA NA NA LEU1 NA NA NA Jemu CATTACTTTTACTTGGATTTGCACCA NA NA NA NA NA LF1 Forward Mitochondrion COI JEMU ATTCAACCAATCATAAAGATATTGG NA NA NA NA NA LH-COIF2 Forward Mitochondrion COI JEMU_RBINS ACRAATCATAAGGATATWGGDACTT Echinodermata: Crinoids MolChaRE "Hemery et al., 2012" LH-COIF2 (aliquot 100 µM) Forward Mitochondrion COI JEMU_RBINS ACRAATCATAAGGATATWGGDACTT Echinodermata: Crinoids MolChaRE "Hemery et al., 2012" LO Forward NA NA JEMU ATGGCCCCTGTTTTACGCAA NA NA NA NA NA LoboF1 Forward Mitochondrion COI JEMU_RBINS (aliquot) KBTCHACAAAYCAYAARGAYATHGG Echinodermata MolChaRE Lobo et al. 2013 LoboR1 Reverse Mitochondrion COI JEMU_RBINS (aliquot) TAAACYTCWGGRTGWCCRAARAAYCA Echinodermata MolChaRE Lobo et al. 2013 LPRO2 Forward Mitochondrion Control_region Vertebrates CTCTCACCCCTAGCTCCCAAAG Fishes NA Bruno_et_al_in_prep NA NA LPro2:_ NA Mitochondrion Dloop JEMU CTCTCACCCCTAGCTCCCAAAG NA NA ? NA NA LR1 Reverse Mitochondrion COI JEMU TAAACTTCTGGATGTCCAAAAAATCA NA NA NA NA NA LR143F Forward Mitochondrion longwavelength_rhodopsin JEMU GACAAAGTKCCACCRGARATGCT ant ANDANT Ward_2005 NA NA LR1TAG2 Reverse Mitochondrion COI JEMU_RBINS CTGGAGTTCAGACGTGTGCTCTTCCGATCTTAAACTTCTGGATGTCCAAAAAATCA Halictidae Halictus LR639ER Reverse Mitochondrion longwavelength_rhodopsin JEMU YTTACCGRTTCCATCCRAACA ant ANDANT Ward_2005 NA NA LRN13398 NA NA 16S/ND1 EVA CGCCTGTTTAACAAAAACAT NA Oonopidae Simon_et_al_1994 NA NA LSU_F1 Forward Nucleus LSU Vertebrates AGCGGAGGAAAAGAAACTA Fishes NA Sonnenberg_R_Nolte_A_W_&_Tautz_D_(2007)_An_evaluation_of_LSU_rdna_D1D2_sequences_for_their_use_in_species_identification_Front_Zool_4_6] NA NA LSU_R1 Reverse Nucleus LSU Vertebrates TACTAGAAGGTTCGATTAGTC Fishes NA Sonnenberg_R_Nolte_A_W_&_Tautz_D_(2007)_An_evaluation_of_LSU_rdna_D1D2_sequences_for_their_use_in_species_identification_Front_Zool_4_6] NA NA LSU-2 Forward Nucleus 28S rDNA Malacology_RBINS GGGTTGTTTGGGAATGCAGC Invertebrates "Wade and Mordan J. Moll. Stud. (2000), 66, 565-570" Part of 5.8S + ITS2 + part (843 nucl.) 28S LSU-5 Reverse Nucleus 28S rDNA Malacology_RBINS GTTAGACTCCTTGGTCCGTG Invertebrates "Wade and Mordan J. Moll. Stud. (2000), 66, 565-570" Part of 5.8S + ITS2 + part (843 nucl.) 28S LWRhF_(OpsinFor) Forward Nucleus LW rhodopsin JEMU_RBINS AATTGCTATTAYGARACNTGGGT Bees HalAfrEu "Mardulyn & Cameron, 1999" "Tannealing=52_Opsin For/Opsin Rev: 94C for 1 min, 52C for 1 min, 720 for 1 min (35cycles)" LWRhFor3_(OpsinFor3) Forward Nucleus LW rhodopsin JEMU_RBINS AGATACAACGTRATCGTSAARGGT Bees HalAfrEu Danforth et al. 2004 "Tannealing=54_OpsinFor3/OpsinR ev:94C for 1 min, 54C for 1 min, 72C for 1 min (35 cycles);" LWRhR_(OpsinRev) Reverse Nucleus LW rhodopsin JEMU_RBINS ATATGGAGTCCANGCCATRAACCA Bees HalAfrEu "Mardulyn & Cameron, 1999" "Tannealing=52_Opsin For/Opsin Rev: 94C for 1 min, 52C for 1 min, 720 for 1 min (35cycles)" M13_Pgd_2F Forward Mitochondrion PGD JEMU AAAACGACGGCCAGTGATATHGARTAYGGNGAYATGCA diptera BC42Wbiodiv Wiegmann_2011 NA NA M13_Pgd_3R Reverse Mitochondrion PGD JEMU CAGGAAACAGCTATGACGTRTGIGCNCCRAARTARTC diptera BC42Wbiodiv Wiegmann_2011 NA NA M13_Pgd_4R Reverse Mitochondrion PGD JEMU CAGGAAACAGCTATGACCCNGTCCARTTNGTRTG diptera BC42Wbiodiv NA NA NA M13F Forward NA tail for seq (no marker) JEMU TGTAAAACGACGGCCAGT for PCR cocktail BarCoVer Messing_1983 NA t1 M13R Reverse NA tail for seq (no marker) JEMU CAGGAAACAGCTATGAC for PCR cocktail BarCoVer Messing_1983 NA t1 M3 NA NA NA JEMU CAGGAAACAGCTATGACCACATYAACATTGTCGTSATYGG NA NA NA NA NA M4 Forward Nucleus Amelogenin JEMU_RBINS CAGCTTCCCAGTTTAAGCTCT Human aDNA_Pacha Faeman 1995 M441 NA NA NA JEMU CAGGAAACAGCTATGACGCTGAGCGYGARCGTGGTATCAC NA NA NA NA NA M461 NA NA NA JEMU CAGGAAACAGCTATGACGAGGAAATYAARAAGGAAG NA NA NA NA NA M519 NA NA NA JEMU CAGGAAACAGCTATGACCARGACGTATACAAAATCGG NA NA NA NA NA M527 NA NA NA JEMU CAGGAAACAGCTATGACGTCAAGGARYTGCGTCGTGG NA NA NA NA NA M5-X Reverse Nucleus Amelogenin JEMU_RBINS TCTCCTATACCACTTAGTCACT Human aDNA_Pacha Faeman 1995 330bp M6-Y Reverse Nucleus Amelogenin JEMU_RBINS GCCCAAAGTTAGTAATTTTACCT Human aDNA_Pacha Faeman 1995 218bp manco1F Forward Mitochondrion COI JEMU_RBINS TACWCGAGCWTATTTTACAGGAGC Mantis ManTiS Svenson and Whiting 2009 MantWg1a Forward Nucleus Wingless JEMU_RBINS GCTGGATGAGGCTGCCCAGCTTTAGAG Mantis ManTiS Svenson and Whiting 2009 MantWg6b Reverse Nucleus Wingless JEMU_RBINS CCARTGGAATGTGCAGKYRCACCTYTCC Mantis ManTiS Svenson and Whiting 2009 MC1RF Forward Nucleus mc1r JEMU_RBINS AGGCNGCCATYGTCAAGAACCGGAACC Reptiles SideReptiles Pinho et al. 2009 280 56° MC1RR Reverse Nucleus mc1r JEMU_RBINS CTCCGRAAGGCRTAAATGATGGGGTCCAC Reptiles SideReptiles Pinho et al. 2009 280 56° MDL3 Forward Mitochondrion D-loop JEMU_RBINS CCCACAATTAATGGGCCCGGAGCG Elephants DIMAMAS Fernando Heredity 2000 used in Lee et al 2013 Journal of forensic and legal medicine 20.3: 174-178 MDL5 Reverse Mitochondrion D-loop JEMU_RBINS TTACATGAATTGGCAGCCAACCAG Elephants DIMAMAS Fernando Heredity 2000 used in Lee et al 2013 Journal of forensic and legal medicine 20.3: 174-178 MetF1=L4437 Forward Mitochondrion ND2 JEMU_RBINS AAGCTTTCGGGCCCATACC Reptiles SideReptiles Macey et al. 1997 50° MLepF1 Forward Mitochondrion COI JEMU GCTTTCCCACGAATAAATAATA NA NA NA NA NA MLepF1TAG1 Forward Mitochondrion COI JEMU_RBINS CTTTCCCTACACGACGCTCTTCCGATCTGCTTTCCCACGAATAAATAATA Halictidae Halictus MLEPHym Forward Mitochondrion COI JEMU_RBINS gcttttccncgaataaayaatatwag Bees HeteroplasHym adapted by Sonet unpublished mt1stND1Fmod Forward Mitochondrion ND1 JEMU_RBINS TTCWGATTCWCCTTCWGCAAAATC Syrphidae:Eristalinae SYRPHIDS "adapted from Tang et al. 2014, Nucleic Acids Research doi: 10.1093/nar/gku917" mt1stND1Rmod Reverse Mitochondrion ND1 JEMU_RBINS TAGGWTATATTCARATTCGTAARGG Syrphidae:Eristalinae SYRPHIDS "adapted from Tang et al. 2014, Nucleic Acids Research doi: 10.1093/nar/gku918" mt1stND5Fmod=rev Reverse Mitochondrion ND5 JEMU_RBINS GATGGDTTAGGWTTAGTWTCTTA Syrphidae:Eristalinae SYRPHIDS "adapted from Tang et al. 2014, Nucleic Acids Research doi: 10.1093/nar/gku920" mt1stND5Rmod=fwd Forward Mitochondrion ND5 JEMU_RBINS CCTATTAAACGYAARTCYTG Syrphidae:Eristalinae SYRPHIDS "adapted from Tang et al. 2014, Nucleic Acids Research doi: 10.1093/nar/gku919" MtD9 Reverse Mitochondrion COI JEMU_RBINS CCCGGTAAAATTAAAATATAAACTTC corbiculate bees Halictidae Simon et al. 1994 743–718 MuskoxH1 Reverse Mitochondrion Control region JEMU_RBINS AAAGGATCCATCATGCGTTGTTGCGT Ovibos moschatus Mitox Campos et al 2010 MuskoxH15808 Reverse Mitochondrion Control region JEMU_RBINS AATACATATCATGTCCTTATTACATTAATACTT Ovibos moschatus Mitox Campos et al 2010 MuskoxH15874 Reverse Mitochondrion Control region JEMU_RBINS GTACTATTACTGAACTCAAATGTACTTGCT Ovibos moschatus Mitox Campos et al 2010 MuskoxH16027 Reverse Mitochondrion Control region JEMU_RBINS GGATACGCATGTTGACAAGG Ovibos moschatus Mitox Campos et al 2010 MuskoxH2b Reverse Mitochondrion Control region JEMU_RBINS AAAGGATCCGCTTGTGTTACATTATGTCT Ovibos moschatus Mitox Campos et al 2010 MuskoxL1 Forward Mitochondrion Control region JEMU_RBINS AAAGGATCCTAAACTACTCCCTGAATT Ovibos moschatus Mitox Campos et al 2010 MuskoxL15663 Forward Mitochondrion Control region JEMU_RBINS TGTTTAGTACGCAACCCATAATCTT Ovibos moschatus Mitox Campos et al 2010 MuskoxL15797 Forward Mitochondrion Control region JEMU_RBINS GTTTCCCCCATGCGTATAA Ovibos moschatus Mitox Campos et al 2010 MuskoxL15890 Forward Mitochondrion Control region JEMU_RBINS CGCGTATAAGCAAGTACATTTGAGT Ovibos moschatus Mitox Campos et al 2010 MuskoxL2 Forward Mitochondrion Control region JEMU_RBINS AAAGAATTCCCAGTATCAAATCTACC Ovibos moschatus Mitox Campos et al 2010 MutR299 Reverse Mitochondrion COI JEMU TAATTGCNCCAGCTAAAACTGGTA Mutillidae NA designed_by_JEMU 299 NA MutR301 Reverse Mitochondrion COI JEMU GTAATTGCNCCAGCTAAAACTG Mutillidae NA designed_by_JEMU 301 NA N1J12261 Forward NA NADH_1 Frederik_Hendrickx TCRTAAGAAATTATTTGAGC none NA Hedin_1997 TL1N12718 mitochondrial N1J12261 NA NA 16S/ND1 EVA TCRTAAGAAATTATTTGAGC NA Oonopidae Hedin_1997 NA NA N610 Reverse Nucleus NaK JEMU_RBINS RGGAGGATCRATCATRGACAT Decapoda GTIGoussanou De Grave et al. (2014) N79 Forward Nucleus NaK JEMU_RBINS GAYAARWCCTCYGAAGGTTGGAA Decapoda GTIGoussanou De Grave et al. (2014) NaKfor2 Forward Nucleus NaK JEMU GCSTTCTTCTCBACSAACGCCGTYGARGG corbiculate Apinae Halictus Kawakita et al. 2008 Tm=62.1 %GC=48.3 NaKrev2 Reverse Nucleus NaK JEMU ACCTTGATRCCGGCYGAWCGGCACTTGGC corbiculate Apinae Halictus Kawakita et al. 2008 Tm=62.1 %GC=58.6 ND1RTL1/N12718 NA NA ND1 EVA TGCATTAGAATTAGAATCTA NA Oonopidae NA NA NA ND41 NA NA NA NA CACCTATGACTACCAAAAGCTCATGTAGAAGC NA NA NA NA NA ND41 NA NA NA Jemu CACCTATGACTACCAAAAGCTCATGTAGAAGC NA NA NA NA NA ND5Ft Forward Nucleus ND5 JEMU TGTAAAACGACGGCCAGTCCAAAATATTCWGATCAHCCYTG Diptera Diptera ND5MrevHym Reverse Mitochondrion ND5 JEMU_RBINS ccgrtttcwtctttagttcattc Bees HeteroplasHym adapted by Sonet unpublished ND5Rt Reverse Nucleus ND5 JEMU CAGGAAACAGCTATGACGGATTAACTGTTTGTTATWCTTTTCG Diptera Diptera Niph15 Forward Nucleus 28S JEMU_RBINS CAAGTACCGTGAGGGAAAGTT Isopoda/Stenasellidae SideIsopodaPM Verovnik et al 2005 see protocol email Flot Niph16 Reverse Nucleus 28S JEMU_RBINS AGGGAAACTTCGGAGGGAACC Isopoda/Stenasellidae SideIsopodaPM Verovnik et al 2005 see protocol email Flot Niph20 Forward Nucleus 28S JEMU_RBINS AAACACGGGCCAAGGAGTAT Isopoda/Stenasellidae SideIsopodaPM Flot et al 2010 internal for seq Niph21 Reverse Nucleus 28S JEMU_RBINS TATACTCCTTGGCCCGTGTT Isopoda/Stenasellidae SideIsopodaPM Flot et al 2010 internal for seq nr Reverse Nucleus NaK JEMU_RBINS ATAGGGTGATCTCCAGTRACCAT Decapoda GTIGoussanou Tsang et al. (2008) NT3F3 Forward NA NA NA ATATTTCTGGCTTTTCTCTGTGGC NA NA NA NA NA NT3F3 Forward NA NA Jemu ATATTTCTGGCTTTTCTCTGTGGC NA NA NA NA NA NT3R4 NA NA NA NA GCGTTTCATAAAAATATTGTTTGACC NA NA NA NA NA NT3R4 Reverse NA NA Jemu GCGTTTCATAAAAATATTGTTTGACC NA NA NA NA NA Opsin-For3(mod) Forward Nucleus LW rhodopsin JEMU_RBINS TTCGAYAGATACAACGTRATCGTNAARGG Bees HalAfrEu Almeida et al. 2006 OpsinFor4 Forward Nucleus LW rhodopsin JEMU_RBINS GAGAARAAYATGCGBGARCAAGC Bees HalAfrEu Danforth et al. 2004 "Tannealing=60_Opsin For4/Opsin Rev4: 94'C for 1 min, 60C for 1 min, 72C for 1 min (35 cycles)" OpsinRev(mod) Reverse Nucleus LW rhodopsin JEMU_RBINS ATANGGNGTCCANGCCATGAACCA Bees HalAfrEu Almeida et al. 2006 OpsinRev4 Reverse Nucleus LW rhodopsin JEMU_RBINS GGTGGTGGTRCCGGARACGGTG Bees HalAfrEu Danforth et al. 2004 "Tannealing=60_Opsin For4/Opsin Rev4: 94'C for 1 min, 60C for 1 min, 72C for 1 min (35 cycles)" OpsinRev4a Reverse Nucleus LW rhodopsin JEMU_RBINS GGTGGTRCCGGARACGGTGGADGT Bees HalAfrEu Danforth et al. 2004 "Tannealing=50-60_Opsin For4/Opsin Rev4a: 94C for 1 min, 50-60C for 1 min, 72'C for 1 min (35 cycles)" P3F Forward Mitochondrion COI JEMU_RBINS CAATACCAAACCCCCTTRTTYGTWTGATC Anura Werneria San Mauro et al. 2000 P3R Reverse Mitochondrion COI JEMU_RBINS GCTTCTCARATAATAAATATYAT Anura Werneria San Mauro et al. 2000 Pan_270291 NA Mitochondrion COI Jemu tatacgggggaatgccatgtcg Panidae BarPan JVH_(not_published) NA in_Tervuren Pan_H165_187 Reverse Mitochondrion COI Jemu ACGCATGGGCTGTGACAATGACA Pan_paniscus BarPan JVH_(not_published) NA in_Tervuren Pan_H172193 Reverse Mitochondrion COI Jemu ttacgaacgcatgggctgtgac Panidae BarPan JVH_(not_published) NA in_Tervuren Pan_H333_354 Reverse Mitochondrion COI Jemu TACTATGGCAGATGCAAGTAGA Pan_paniscus BarPan JVH_(not_published) NA in_Tervuren Pan_H336_357 Reverse Mitochondrion COI Jemu TTCTACTATGGCAGATGCAAGT Pan_paniscus BarPan JVH_(not_published) NA in_Tervuren Pan_L126 Forward Mitochondrion COI Jemu atgttcaccgaccgctgacta Panidae BarPan JVH_(not_published) NA in_Tervuren Pan_L521 Forward Mitochondrion COI Jemu TCACCGACCGCTGACTATTCTC Panidae BarPan JVH_(not_published) NA in_Tervuren PDRWR04t Reverse Nucleus cytochrome b (cob) JEMU CAGGAAACAGCTATGACATTTCACGCTCATTAACT Diptera Diptera Period1265F2 Forward Nucleus Period JEMU GCDAGTCAAATAACAACHGG SYRPHIDS Period1844R4 Reverse Nucleus Period JEMU CCAGTTTTCTAGACCAGGGATTTAC SYRPHIDS Pex1F Forward Mitochondrion CR JEMU_RBINS TAAACTATTCCCTGATACTC Alopex lagopus DNADD Dalen et al. 2002 ca 150 bp Pex1R Reverse Mitochondrion CR JEMU_RBINS TTAAGCATAGTATGTCTTATG Alopex lagopus DNADD Dalen et al. 2002 ca 150 bp Pex2bF Forward Mitochondrion CR JEMU_RBINS ATGCCCCATGCATATAAGC Alopex lagopus DNADD Dalen et al. 2002 ca 150 bp Pex2bR Reverse Mitochondrion CR JEMU_RBINS TTGATGGTTTCTCGAGGC Alopex lagopus DNADD Dalen et al. 2002 ca 150 bp Pex2F Forward Mitochondrion CR JEMU_RBINS CCATGCATATAAGCATGTAC Alopex lagopus DNADD Dalen et al. 2002 ca 150 bp Pex2R Reverse Mitochondrion CR JEMU_RBINS GATGGTTTCTCGAGGCATG Alopex lagopus DNADD Dalen et al. 2002 ca 150 bp Pex3F Forward Mitochondrion CR JEMU_RBINS TTAGTCCAATAAGGGATTTATC Alopex lagopus DNADD Dalen et al. 2002 ca 150 bp PGMF Forward Nucleus PGM JEMU_RBINS CCCAGGTGGTCCAAATGC Oligochaetes PGMR Reverse Nucleus PGM JEMU_RBINS GTACAGATGTCAGCCTTCAGGTC Oligochaetes PHK-s1F Forward Nucleus JEMU_RBINS TGTGCTCTCCTGTTGCTTTG Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C PHK-s1R Reverse Nucleus JEMU_RBINS ACCTACTTGTTGCTGACTTTTGAA Loxodonta & Elephas DNADD Cappellini et al. 2013 105-370 bp Annealing of 30 s at 50 or 52 °C PJSYR1F Forward Nucleus PJ JEMU CCWGGATTYGGWATWATYTC SYRPHIDS PJSYR2R Reverse Nucleus PJ JEMU GGTAATTCSGAATASCTRTG SYRPHIDS Poly_ND4_F1 Forward Mitochondrion ND4 JEMU_RBINS TKCKGTWTGTGAAGGTGCTTTAGG Mantis ManTiS Svenson and Whiting 2009 Poly_ND4_F2 Forward Mitochondrion ND4 JEMU_RBINS TAGTTCATTTRTGRTTACCTAARGCY Mantis ManTiS Svenson and Whiting 2009 Poly_ND4_R1 Reverse Mitochondrion ND4 JEMU_RBINS WMACMCCACAAATCAKWAT Mantis ManTiS Svenson and Whiting 2009 RCcorrected Poly_ND4_R2 Reverse Mitochondrion ND4 JEMU_RBINS AWGCAGAAGAACATAAWCCATGVGC Mantis ManTiS Svenson and Whiting 2009 PRLR_f1 Forward Nucleus PRLR JEMU GACARYGARGACCAGCAACTRATGCC Mammals BarCoVer_Mammals Townsend_et_al_2016 NA NA PRLR_f1mam Forward Nucleus PRLR JEMU GACARYGAGGACCAGCAKCTRATGCC Mammals BarCoVer_Mammals Townsend_et_al_2017 NA NA PRLR_r3 Reverse Nucleus PRLR JEMU GACYTTGTGRACTTCYACRTAATCCAT Mammals BarCoVer_Mammals Townsend_et_al_2018 NA NA PRLR_r3mam Reverse Nucleus PRLR JEMU GACYTTGTGAATCTCCACRTAATC Mammals BarCoVer_Mammals Townsend_et_al_2019 NA NA ProR1_ Reverse NA Pro Synodontis TAGTTTAGTTTAGAATTCTGGCTTTGG Synodontis NA NA NA NA Psic16Sf Forward Mitochondrion 16S Robin_Rotsaert TAACCGTGCAAAGGTAGCATAA reptiles Podarcis NA NA NA Psic16Sr Reverse Mitochondrion 16S Robin_Rotsaert ATCCAACATCGAGGTCGTAAAC reptiles Podarcis NA NA NA PsiCo1aF5266 Forward Mitochondrion COI Robin_Rotsaert TATTACTCAGCCATCCTACCTGTGT reptiles Podarcis NA NA PsiCo1aF5266>PsiCo1bR6007_covers_most_of_LCO1490>HCO2198 PsiCo1aR5753 Reverse Mitochondrion COI Robin_Rotsaert GARACTCCTGCTARATGAAGTGAAA reptiles Podarcis NA NA PsiCo1aF5266>PsiCo1bR6007_covers_most_of_LCO1490>HCO2199 PsiCo1bF5554 Forward Mitochondrion COI Robin_Rotsaert CCTGACATAGCATTTCCACGAATA reptiles Podarcis NA NA PsiCo1aF5266>PsiCo1bR6007_covers_most_of_LCO1490>HCO2200 PsiCo1bR6007 Reverse Mitochondrion COI Robin_Rotsaert GTGACCAAAGAATCAGAAYAGGTGT reptiles Podarcis NA NA PsiCo1aF5266>PsiCo1bR6007_covers_most_of_LCO1490>HCO2201 Psico1dF Forward Mitochondrion COI Robin_Rotsaert GCGCTCCTGACATAGCATT reptiles Podarcis NA NA NA Psico1dR Reverse Mitochondrion COI Robin_Rotsaert TCTGGGTGACCAAAGAATCA reptiles Podarcis NA NA NA PTPN12_f1 Forward Nucleus PTPN JEMU AGTTGCCTTGTWGAAGGRGATGC Mammals BarCoVer_Mammals Townsend_et_al_2008 NA NA PTPN12_f1mam Forward Nucleus PTPN JEMU AGTTGCCTTGTAGAAGGGGATGC Mammals BarCoVer_Mammals Townsend_et_al_2009 NA NA PTPN12_r6 Reverse Nucleus PTPN JEMU CTRGCAATKGACATYGGYAATAC Mammals BarCoVer_Mammals Townsend_et_al_2010 NA NA PTPN12_r6mam Reverse Nucleus PTPN JEMU CTRGCAATGGACATYGGYAATAC Mammals BarCoVer_Mammals Townsend_et_al_2011 NA NA PUN-CCR-F Forward Mitochondrion Control region JEMU_RBINS CACCTGGCCTCGAGAAAC Feliformia Janecka et al. PUN-CCR-F173 Forward Mitochondrion Control region JEMU_RBINS CAACTTTCTCAAATAGGACATCTCG Feliformia Janecka et al. PUN-CCR-R Reverse Mitochondrion Control region JEMU_RBINS TATATGTCCTGCGACCATTGA Feliformia Janecka et al. PUN-CCR-R254 Reverse Mitochondrion Control region JEMU_RBINS CCAAATGCATGACACCACAG Feliformia Janecka et al. Py1F Forward Nucleus rag2 JEMU_RBINS CCCTGAGTTTGGATGCTGTACTT Reptiles SideReptiles Gamble et al. 2008 1037 53º Py1R Reverse Nucleus rag2 JEMU_RBINS AACTGCCTRTTGTCCCCTGGTAT Reptiles SideReptiles Gamble et al. 2008 1037 53º R Reverse Nucleus GAPDH JEMU_RBINS GAATAGCCTAACTCGTTGTCRTACCA Decapoda GTIGoussanou Tsang et al. (2011) R_ATP Reverse NA ATP_synthase_6+8 Vertebrates TATGCRTGTGCTTGMTGGGC Fishes NA Bruno_et_al_in_prep NA NA R_C1N_2191t Reverse Mitochondrion COI JEMU CAGGAAACAGCTATGACCCCGGTAAAATTAAAATATAAACTTC Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2000 R_C1N2191 Reverse Mitochondrion COI JEMU CCCGGTAAAATTAAAATATAAACTTC Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2000 NA same_as_mtd9_from_primers_Singapore_via_Grootaert R_C1N2293a Reverse Mitochondrion COI JEMU AGTAAACCAATTGCTAGTATAGC Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2005 NA NA R_C1N2659 Reverse Mitochondrion COI JEMU GCTAATCCAGTGAATAATGG Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2002 NA NA R_C1N2659t Reverse Mitochondrion COI JEMU CAGGAAACAGCTATGACGCTAATCCAGTGAATAATGG Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2002 R_TL2N3013 Reverse Mitochondrion COI JEMU TCCATTACATATAATCTGCCATATTAG Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2004 NA NA R_TL2N3013t Reverse Mitochondrion COI JEMU CAGGAAACAGCTATGACTCCATTACATATAATCTGCCATATTAG Diptera:calliphoridae BC42W Wells_et_al_ForSciInt_2001_or_Wells_&_Sperling_JMedEntomol2004 R13 Forward Nucleus rag1 long JEMU_RBINS TCTGAATGGAAATTCAAGCTGTT Reptiles SideReptiles Groth and Barrowclough 1999 410 58° R18 Reverse Nucleus rag1 long JEMU_RBINS GATGCTGCCTCGGTCGGCCACCTTT Reptiles SideReptiles Groth and Barrowclough 1999 410 58° R2 Reverse Mitochondrion COI JEMU_RBINS WCCWACDGTRAAYATRTGRTGDGC Mantis ManTiS Svenson and Whiting 2009 R6036R Reverse Mitochondrion COI JEMU ACTTCTGGGTGTCCAAAGAATCA rodent Demotroro NA NA NA R700 Reverse Nucleus rag1 short JEMU_RBINS TTTGTACTGAGATGGATCTTTTTGCA Reptiles SideReptiles Bauer et al. 2007 1023 53º RAG1.AMP.R1 Reverse Nucleus RAG1 JEMU_RBINS AACTCAGCTGCATTKCCAATRTCA Anura Werneria Páez-Moscoso and Guayasamin 2012 RAG1.Mart.FL1 Forward Nucleus RAG1 JEMU_RBINS AGCTGCAGYCARTAYCAYAARATGTA Anura Werneria Páez-Moscoso and Guayasamin 2012 RAG1_C Forward Nucleus RAG1 JEMU_RBINS GGAGATGTTAGTGAGAARCAYGG Anura Werneria Biju and Bossuyt 2003 RAG1_E Reverse Nucleus RAG1 JEMU_RBINS TCCGCTGCATTTCCRATGTCRCA Anura Werneria Biju and Bossuyt 2003 RAG1_UCF Forward NA NA JEMU GGGMGGCAGATCTTYCAGCC NA NA NA NA NA RAG1_UCR Reverse NA NA JEMU TTGGACTGCCTGGCATTCAT NA NA NA NA NA RAG1skink-F2 Forward Nucleus rag1 JEMU_RBINS TTCAAAGTGAGATCGCTTGAAA Reptiles SideReptiles Portik et al. 2010 1041 50° RAG1skink-R1200 Reverse Nucleus rag1 JEMU_RBINS CCCTTCTTCTTTCTCAGCAAAA Reptiles SideReptiles Portik et al. 2010 1041 50° rc28D Forward Nucleus 28S JEMU CCGCAGCTGGTCTCCAAG Diptera BC42W Wiegmann_et_al_2000_AnnEntSocAM NA NA rc28H Forward Nucleus 28S JEMU CTACTATCCAGCGAAACC Diptera BC42W Wiegmann_et_al_2000_AnnEntSocAM NA NA rc28p Forward Nucleus 28S JEMU TGGTATGCGTAGAAGTGTTTGGC Diptera BC42W Wiegmann_et_al_2000_AnnEntSocAM NA NA rc28Q Forward Nucleus 28S JEMU GGACATTGCCAGGTAGGGAGTT Diptera BC42W Wiegmann_et_al_2000_AnnEntSocAM NA NA rcM4 NA NA NA JEMU TGTAAAACGACGGCCAGTACAGCVACKGTYTGYCTCATRTC NA NA NA NA NA rcM449 NA NA NA JEMU TGTAAAACGACGGCCAGTCTTGATGAAATCYCTGTGTCC NA NA NA NA NA rcM511 NA NA NA JEMU TGTAAAACGACGGCCAGTCATRTTGTCKCCGTGCCAKCC NA NA NA NA NA rcM526 NA NA NA JEMU TGTAAAACGACGGCCAGTGCYTCGTGGTGCATYTCSAC NA NA NA NA NA rcM532 NA NA NA JEMU TGTAAAACGACGGCCAGTGCAATGTGRGCIGTGTGGCA NA NA NA NA NA RD1F Forward Mitochondrion CR JEMU_RBINS CCACYAACCAYACRACARAA Elaphus cervus DNADD Carden et al 2012 ca150bp PCR cond as in Stock et al.2009 but with annealing at 52 °C RD1R Reverse Mitochondrion CR JEMU_RBINS TTRTTTAYAGTACATAGTRCATGATG Elaphus cervus DNADD Carden et al 2013 ca150bp PCR cond as in Stock et al.2009 but with annealing at 52 °C RD2F Forward Mitochondrion CR JEMU_RBINS GCCCCATGCWTATAAGCATG Elaphus cervus DNADD Carden et al 2014 ca150bp PCR cond as in Stock et al.2009 but with annealing at 52 °C RD2R Reverse Mitochondrion CR JEMU_RBINS CCATGCCGCGTGAAACCA Elaphus cervus DNADD Carden et al 2015 ca150bp PCR cond as in Stock et al.2009 but with annealing at 52 °C RD3F Forward Mitochondrion CR JEMU_RBINS GATCACGAGCTTGRTYACC Elaphus cervus DNADD Carden et al 2016 ca150bp PCR cond as in Stock et al.2009 but with annealing at 52 °C RD3R Reverse Mitochondrion CR JEMU_RBINS TTCAGGGCCATCTCACCTAA Elaphus cervus DNADD Carden et al 2017 ca150bp PCR cond as in Stock et al.2009 but with annealing at 52 °C RepCOIF Forward Mitochondrion COI Jemu TNTTMTCAACNAACCACAAAGA Reptiles BARMAR Nagy et al. 2012 NA NA RepCOIoutF Forward Mitochondrion COI Jemu GYGGGCCTCGATCCYACAA Reptiles BARMAR ZN_(not_published) NA NA RepCOIoutR Reverse Mitochondrion COI Jemu GCRAAKACTGCNCCTATTGAT Reptiles BARMAR ZN_(not_published) NA NA RepCOIR Reverse Mitochondrion COI JEMU ACTTCTGGRTGKCCAAARAATCA Reptiles BARMAR Nagy et al. 2012 NA NA REV_ 16S Palumbi 1996 Reverse Mitochondrion 16S JEMU_RBINS CCGGTTTGAACTCAGATCA Anura Werneria Palumbi 1996 RICS741F Forward NA Rickettsia Frederik_Hendrickx CATCCGGAGCTAATGGTTTTGC NA NA Goodacre_et_al_2006 RICT1197R bacterial RICT1197R Reverse NA Rickettsia Frederik_Hendrickx CATTTCTTTCCATTGTGCCATC NA NA Goodacre_et_al_2006 RICS741F bacterial Ron Forward Mitochondrion COI JEMU_RBINS GGAGCYCCWGATATAGCTTTCCC universal Halictidae "Simon et al 1994 used by Frampton et al., 2008 - Evaluation of Specimen Preservatives for DNA Analyses of Bees" alias C1-J-1751 RTAG2 Reverse Nucleus JEMU_RBINS CTGGAGTTCAGACGTGTGCTCTTCCGATCTGGRGGRTARAYAGTTCATCCWGTWCC Halictidae Halictus RYR3_F15 Forward NA RYR Vertebrates GGAACTATYGGTAAGCARATGG Fishes NA Li_et_al_2007 NA NA RYR3_F22 Forward NA RYR Vertebrates TCGGTAAGCARATGGTGGACA Fishes NA Li_et_al_2007 NA NA RYR3_R931 Reverse NA RYR Vertebrates AGAATCCRGTGAAGAGCATCCA Fishes NA Li_et_al_2007 NA NA RYR3_R968 Reverse NA RYR Vertebrates TGGAAGAAKCCAAAKATGATGC Fishes NA Li_et_al_2007 NA NA SACSF1 Forward Nucleus SACS JEMU_RBINS AARGARATHTGGAARACNGAYAC Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39264 1st PCR SACSF2 Forward Nucleus SACS JEMU_RBINS AAYATHACNAAYGCNTGYTAYAA Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39268 1st PCR SACSNF1 Forward Nucleus SACS JEMU_RBINS CAYCCYGAAGGAMGNGTNGCNAA Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39266 2nd nested PCR SACSNF2 Forward Nucleus SACS JEMU_RBINS TGYTAYAAYGAYTGYCCNTGGAT Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39270 2nd nested PCR SACSNR1 Reverse Nucleus SACS JEMU_RBINS GCWACYTCYCKNGGDATRTC Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39267 2nd nested PCR SACSNR2 Reverse Nucleus SACS JEMU_RBINS CKGTGRGGYTTYTTRTARTTRTG Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39271 2nd nested PCR SACSR1 Reverse Nucleus SACS JEMU_RBINS GCYTTNGCRTCRTCNGCRTTYTG Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39265 1st PCR SACSR2 Reverse Nucleus SACS JEMU_RBINS GCRAARTGNCCRTTNACRTGRAA Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39269 1st PCR SpitsJ04 Forward NA Spiroplasma Frederik_Hendrickx GCCAGAAGTCAGTGTCCTAACCG NA NA Goodacre_et_al_2006 NA bacterial SpitsN55 Reverse NA Spiroplasma Frederik_Hendrickx ATTCCAAGGCATCCACCATACG NA NA Goodacre_et_al_2006 NA bacterial SPTBN1A Forward Nucleus SPTBN JEMU TCTCAAGACTATGGCAAACA Mammals BarCoVer_Mammals Matthee_et_al_2001 NA NA SPTBN1B Reverse Nucleus SPTBN JEMU CTGCCATCTCCCAGAAGAA Mammals BarCoVer_Mammals Matthee_et_al_2001 NA NA SPTBN1C Forward Nucleus SPTBN JEMU GAAGACCTGTTACAGAAGCA Mammals BarCoVer_Mammals Matthee_et_al_2001 NA NA SPTBN1D Reverse Nucleus SPTBN JEMU TCTGCTGCCAACTGGCAAAGC Mammals BarCoVer_Mammals Matthee_et_al_2001 NA NA SRY10831.2_Forward Forward Mitochondrion SRY10831.2_ GTATCTGGCCTCTTGTATCTGACTTTTTC Human aDNA_Tournai Haak 2008 SRY10831.2_Reverse Reverse Mitochondrion SRY10831.2_ AGCAAAAAATGACACAAGGCACC Human aDNA_Tournai Haak 2008 SRY3F1____ Forward Nucleus SRY JEMU CATGTAAAGAATTCAGACTTTCC Mammals BarCoVer_Mammals Hassanin_&_Ropiquet_2009 NA NA SRY3F2 Forward Nucleus SRY JEMU CTGCTTGAGTTCAAAGATCATC Mammals BarCoVer_Mammals Hassanin_&_Ropiquet_2011 NA NA SRY3R1____ Reverse Nucleus SRY JEMU CCATCTAACTAATGACCAATCTC Mammals BarCoVer_Mammals Hassanin_&_Ropiquet_2010 NA NA SRY3R2_ Reverse Nucleus SRY JEMU AGGGAGCTTTCCATCCAAGTAC Mammals BarCoVer_Mammals Hassanin_&_Ropiquet_2012 NA NA SRY5F__40_________ Forward Nucleus SRY JEMU CCTGTTAAGTAGCTTTGCTTGAG Mammals BarCoVer_Mammals Hassanin_&_Ropiquet_2007 NA NA SRY5R_______ Reverse Nucleus SRY JEMU CACAGCTGGACTGTAAACATCGT Mammals BarCoVer_Mammals Hassanin_&_Ropiquet_2008 NA NA SRY-F Forward Nucleus SRY TCGGGTAACATTGGCTACAAAGA Human aDNA_Tournai Masuyama 2017 52 Sense primer sets SRY-F Forward Nucleus SRY TCGGGTAACATTGGCTACAAAGA Human aDNA_Tournai Masuyama 2017 52 Antisense primer sets SRY-R Reverse Nucleus SRY GTTATCGTAAAAAGGAGCATCTAGGTAG Human aDNA_Tournai Masuyama 2017 Sense primer sets SRY-R Reverse Nucleus SRY GTTATCGTAAAAAGGAGCATCTAGGTAG Human aDNA_Tournai Masuyama 2017 Antisense primer sets symC1J1718_ Forward Mitochondrion COI JEMU GGAGGATTTGGAAAYTGAYTAGTWCC sawfly ECES_PSEU mod_from_Simon_et_al_1994 NA NA TDKDH4SHORT NA Mitochondrion Control_region Vertebrates GATCCCATCTTCAGTGTTATGC Fishes NA Bruno_et_al_in_prep NA NA TDKDH4short:_ NA Mitochondrion Dloop JEMU GATCCCATCTTCAGTGTTATGC NA NA ? NA NA ThrR1_ Reverse NA Thr Synodontis TTTAGAATTCTGGCTTTGGGAG Synodontis NA NA NA NA TimA-F Forward Nucleus 18S JEMU_RBINS (aliquot) AMCTGGTTGATCCTGCCAG Annelida Cryoli "Norén, M. & Jondelius, U. (1999) Phylogeny of the Prolicithophora (Platyhelminthes) inferred from 18S rDNA sequences. Cladistics, 15, pp. 103–112" 1750bp TimA-F Forward Nucleus 18S JEMU_RBINS AMCTGGTTGATCCTGCCAG Annelida Cryoli "Norén, M. & Jondelius, U. (1999) Phylogeny of the Prolicithophora (Platyhelminthes) inferred from 18S rDNA sequences. Cladistics, 15, pp. 103–112" 1750bp TimB-R Reverse Nucleus 18S JEMU_RBINS (aliquot) TGATCCATCTGCAGGTTCACCT Annelida Cryoli "Norén, M. & Jondelius, U. (1999) Phylogeny of the Prolicithophora (Platyhelminthes) inferred from 18S rDNA sequences. Cladistics, 15, pp. 103–112" 1750bp TimB-R Reverse Nucleus 18S JEMU_RBINS TGATCCATCTGCAGGTTCACCT Annelida Cryoli "Norén, M. & Jondelius, U. (1999) Phylogeny of the Prolicithophora (Platyhelminthes) inferred from 18S rDNA sequences. Cladistics, 15, pp. 103–112" 1750bp TKN3775t Reverse Mitochondrion COII Jemu_Tervuren CAGGAAACAGCTATGACGAGACCATTACTTGCTTTCAGTCATCT Diptera BC42W NA NA TK-N3796mod Reverse Mitochondrion COII JEMU_RBINS ACTATaAcATGGTTTAAGAG Syrphidae:Eristalinae SYRPHIDS adapted from Lewis et al MPE 2006 TK-N-3814mod Reverse Mitochondrion COII JEMU_RBINS TTAaAAGTAAgTGCTARATTAC Syrphidae:Eristalinae SYRPHIDS adapted from Ho-Yeon Han 2005 MPE 34 416-430 TL1N12718 Reverse NA NADH_1 Frederik_Hendrickx TGCATTAGAATTAGAATCTA none NA Hedin_1997 N1J12261 mitochondrial TL2-J-3045 Forward Mitochondrion COII JEMU_RBINS GATTAGTGCAATGGATTTAAGC Syrphidae:Eristalinae SYRPHIDS Ho-Yeon Han 2005 MPE 34 416-430 tLysR Reverse Mitochondrion COII JEMU GTTTAAGAGACCAGTACTTG Termites DAG Liu_and_Beckenbach_1992 NA NA TSIN11683t Reverse Nucleus cytochrome b (cob) JEMU CAGGAAACAGCTATGACAAATTCTATCTTATGTTTTCAAAAC Diptera:Sarcophagidae NICC "Ready et al., 2009, Medical and Veterinary Entomology" TTNF1 Forward Nucleus TTN JEMU_RBINS TATGCTGARAAYATNGCNGGNAT Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39272 1st PCR TTNF2 Forward Nucleus TTN JEMU_RBINS TAYATYGTNGARAARCGNGARAC Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39276 1st PCR TTNNF1 Forward Nucleus TTN JEMU_RBINS GATGGNMGKTGGYTNAARTGYAA Universal nuclear proteincoding locus (NPCL) Shen et al (2011) Mol Biol Evol 28: 3237–3252. 2nd nested PCR TTNNF2 Forward Nucleus TTN JEMU_RBINS GGYAAYGARTAYRTHTTYAGRGT Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39278 2nd nested PCR TTNNR1 Reverse Nucleus TTN JEMU_RBINS AGRTCRTANACNGGYTTYTTRTT Universal nuclear proteincoding locus (NPCL) Shen et al (2011) Mol Biol Evol 28: 3237–3252. 2nd nested PCR TTNNR2 Reverse Nucleus TTN JEMU_RBINS GCWCCWCCNTCRTTNTCNGG Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39279 2nd nested PCR TTNR1 Reverse Nucleus TTN JEMU_RBINS CCMCCRTCAAAYARNGGYTT Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39273 1st PCR TTNR2 Reverse Nucleus TTN JEMU_RBINS TCRCCWGWNACYCTRAARTARTA Universal nuclear proteincoding locus (NPCL) Shen et al (2012) PLoS ONE 7(6): e39277 1st PCR UAE3 Forward Mitochondrion COI JEMU_RBINS TATAGCATTCCCACGAATAAATAA Bees Isebaf&Aculea Praz2019 409 UBN1_f1 Forward Nucleus UBN JEMU CCYCTMAATTTYCTGGCWGARCAGGC Mammals BarCoVer_Mammals Townsend_et_al_2012 NA NA UBN1_f1mam Forward Nucleus UBN JEMU CCYCTCAATTTTCTGGCWGARCAGGCT Mammals BarCoVer_Mammals Townsend_et_al_2013 NA NA UBN1_r2 Reverse Nucleus UBN JEMU GGTCAGYAAYTTKGCCACHCCYT Mammals BarCoVer_Mammals Townsend_et_al_2014 NA NA UBN1_r2mam Reverse Nucleus UBN JEMU GGTCAGYAAYTTKGCCACHCCCT Mammals BarCoVer_Mammals Townsend_et_al_2015 NA NA UniMinibarF1d Forward Mitochondrion COI JEMU TCYACTAATCATAAAGATATTGGYAC Sarcophaga BC42WNICC NA NA NA Uni-MinibarF1-squatina Forward Mitochondrion COI JEMU_RBINS CTACAAATCACAAAGATATTGGCAC Squatina squatina Squatina UniMinibarR1d Reverse Mitochondrion COI JEMU AAAATTATAATAAARGCRTGRGC Sarcophaga BC42WNICC NA NA NA Uni-MinibarR1-squatina Reverse Mitochondrion COI JEMU_RBINS ATTATCACCAAAGCGTGGGC Squatina squatina Squatina uPhe1H Reverse NA NA NA GCATCTTCAGTGCYATGCTT NA NA NA NA NA uThr1L Forward NA NA NA AAAGCATTGGTCTTGTAARCC NA NA NA NA NA VF1_t1 Forward Mitochondrion COI JEMU TGTAAAACGACGGCCAGTTCTCAACCAACCACAAAGACATTGG Mammal_rept_fish_amph_cocktail BarCoVer Ivanova_et_al_2007 6446 COI2_C_VF1LFt1 VF1d_t1 Forward Mitochondrion COI JEMU TGTAAAACGACGGCCAGTTCTCAACCAACCACAARGAYATYGG Mammal_rept_fish_amph_cocktail BarCoVer Ivanova_et_al_2006 6446 COI2_C_VF1LFt1 VF2 Forward Mitochondrion COI JEMU CAACCAACCACAAAGACATTGGCAC Fish BarCoVer Ivanova_et_al_2007 NA NA VF2_t1_ Forward Mitochondrion COI JEMU TGTAAAACGACGGCCAGTCAACCAACCACAAAGACATTGGCAC fish_mammal_cocktail BarCoVer Ward_et_al_2005 6448 COI3_C_FishF1t1 VR1_t1_ Reverse Mitochondrion COI JEMU CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCAAAGAATCA Mammal_rept_fish_amph_cocktail BarCoVer Ward_et_al_2005 7155 COI2_C_VF1LFt1 VR1d_t1 Reverse Mitochondrion COI JEMU CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCRAARAAYCA Mammal_rept_fish_amph_cocktail BarCoVer Ivanova_et_al_2006 7155 COI2_C_VF1LFt1 WECF21t Forward Nucleus Whitegenegene JEMU TGTAAAACGACGGCCAGTGTTTGTGGCGTAGCCTATCC Diptera:Sarcophagidae NICC "Ready et al., 2009, Medical and Veterinary Entomology) (617bp)" WECR12t Reverse Nucleus Whitegenegene JEMU CAGGAAACAGCTATGACAATGTCACTCTACCYTCGGC Diptera:Sarcophagidae NICC "Ready et al., 2009, Medical and Veterinary Entomology) (617bp)" Wg1032R Reverse Mitochondrion Wingless JEMU ACYTCGCAGCACCARTGGAA ant ANDANT Abouheif_&_Wray_2002 NA NA Wg1032RTAG2 Reverse Nucleus wingless JEMU_RBINS CTGGAGTTCAGACGTGTCCTCTTCCGATCTACYTCGCAGCACCARTGGAA Halictidae Halictus Wg578F Forward Mitochondrion Wingless JEMU TGCACNGTGAARACYTGCTGGATGCG ant ANDANT Ward_&_Downie_2005 NA NA Wg578FTAG1 Forward Nucleus wingless JEMU_RBINS CTTTCCCTACACGACGCTCTTCCGATCTTGCACNGTGAARACYTGCTGGATGCG Halictidae Halictus Wg-Collet-For Forward Nucleus Wingless JEMU_RBINS CACGTGTCBTCBGRGATGMGRSAGGA Bees HalAfrEu Almeida et al. 2006 55 whitefor2 Forward Nucleus white gene JEMU GCTGARGGWAGAGTAGCYTTCATGGG corbiculate Apinae Halictus Kawakita et al. 2008 Tm=56 %GC=50 Whitegenefor2TAG1 Forward Nucleus Whitegene JEMU_RBINS CTTTCCCTACACGACGCTCTTCCGATCTGCTGARGGWAGAGTAGCYTTCATGGG Halictidae Halictus WhitegeneHalF1 Forward Nucleus Whitegene JEMU_RBINS ATCGCCGTACAARGCAWCTTGGT Halictidae Halictus WhitegeneHalF1TAG1 Forward Nucleus Whitegene JEMU_RBINS CTTTCCCTACACGACGCTCTTCCGATCTATCGCCGTACAARGCAWCTTGGT Halictidae Halictus WhitegeneHalF2 Forward Nucleus Whitegene JEMU_RBINS CGAACAATTTCGCGCGGTTCT Halictidae Halictus WhitegeneHalF3 Forward Nucleus Whitegene JEMU_RBINS TGGCTATCCGTCGTCAARGA Halictidae Halictus WhitegeneHalR1 Reverse Nucleus Whitegene JEMU_RBINS ATGGGTTCYTTGAYGACGGATAGC Halictidae Halictus WhitegeneHalR1TAG2 Reverse Nucleus Whitegene JEMU_RBINS CTGGAGTTCAGACGTGTGCTCTTCCGATCTATGGGTTCYTTGAYGACGGATAGC Halictidae Halictus WhitegeneHalR2 Reverse Nucleus Whitegene JEMU_RBINS TTGATGAGRATGGGTTCYTTGA Halictidae Halictus WhitegeneHalR3 Reverse Nucleus Whitegene JEMU_RBINS TCTGCAGCAACCGRAYCTTGA Halictidae Halictus WhitegeneHalR4 Reverse Nucleus Whitegene JEMU_RBINS CGCAAGWACGTACRACGGTCT Halictidae Halictus Whitegenerev2TAG2 Reverse Nucleus Whitegene JEMU_RBINS CTGGAGTTCAGACGTGTGCTCTTCCGATCTCSGCRAARACGTTCTGGAARGTCATATT Halictidae Halictus whiterev2 Reverse Nucleus white gene JEMU CSGCRAARACGTTCTGGAARGTCATATT corbiculate Apinae Halictus Kawakita et al. 2008 Tm=54.8 %GC=35.7 WN-1708R Reverse Nucleus 18S JEMU_RBINS TGATCCATCTGCAGGTTCACCT Holothuroidea SideEchino Lacey et al. 2005 wsp F1 Forward Wolbachia surface protein JEMU_RBINS GTCCAATARSTGATGARGAAAC Wolbachia Halictus wsp R1 Forward Wolbachia surface protein JEMU_RBINS CYGCACCAAYAGYRCTRTAAA Wolbachia Halictus Wsp691Rant Reverse NA Wolbachia_WSP Frederik_Hendrickx AAAAATTAAACGCTACTCCA NA NA Viljakainen_et_al_2008 NA bacterial wsp691RantTAG2 Reverse Wolbachia surface protein JEMU_RBINS CTGGAGTTCAGACGTGTGCTCTTCCGATCTAAAAATTAAACGCTACTCCA Wolbachia Halictus Wsp691Rspider Reverse NA Wolbachia_WSP Frederik_Hendrickx AAAAATTAAACGCTACTCCAGCTTCTGCAC NA NA Goodacre_et_al_2006 NA bacterial wsp81Fant Forward NA Wolbachia_WSP Frederik_Hendrickx TGGTCCAATAAGTGATGAAGAAAC ants NA Viljakainen_et_al_2008 NA bacterial wsp81FantTAG1 Forward Wolbachia surface protein JEMU_RBINS CTTTCCCTACACGACGCTCTTCCGATCTTGGTCCAATAAGTGATGAAGAAAC Wolbachia Halictus wsp81Fspider Forward NA Wolbachia_WSP Frederik_Hendrickx TGGTCCAATAAGTGATGAAGAAACTAGCTA NA NA Goodacre_et_al_2006 NA bacterial ZR2 NA Nucleus 28S_rDNA Frederik_Hendrickx GCTATCCTGAGGGAAACTTCGG 28S_short NA Bond_&_Hedin_2006 NA nuclear ZR3 NA Nucleus 28S_rDNA Frederik_Hendrickx GAAAAGAACTTTGAAGAGAGAGTTCA 28S_short NA Bond_&_Hedin_2006 NA nuclear